Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.2■□□□□ 0.02
Srrm3Q80WV7 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Gm15590-201ENSMUST00000078419 552 ntBASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Srrm3Q80WV7 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Gm15165-201ENSMUST00000118140 502 ntBASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Gm8344-201ENSMUST00000119813 856 ntBASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Gm6089-201ENSMUST00000197666 938 ntBASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Gm44872-201ENSMUST00000207864 420 ntBASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Srrm3Q80WV7 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Gm13312-201ENSMUST00000119631 718 ntBASIC15.18■□□□□ 0.02
Srrm3Q80WV7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Srrm3Q80WV7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms