Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.2■□□□□ 0.02
Prdm4Q80V63 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prdm4Q80V63 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.19■□□□□ 0.02
Prdm4Q80V63 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prdm4Q80V63 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.19■□□□□ 0.02
Prdm4Q80V63 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Gm9279-201ENSMUST00000223175 1606 ntBASIC15.19■□□□□ 0.02
Prdm4Q80V63 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.19■□□□□ 0.02
Prdm4Q80V63 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Prdm4Q80V63 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.19■□□□□ 0.02
Prdm4Q80V63 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.19■□□□□ 0.02
Prdm4Q80V63 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Prdm4Q80V63 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.18■□□□□ 0.02
Prdm4Q80V63 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prdm4Q80V63 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.18■□□□□ 0.02
Prdm4Q80V63 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prdm4Q80V63 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prdm4Q80V63 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prdm4Q80V63 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prdm4Q80V63 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms