Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf220Q6PDX6 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Gm25406-201ENSMUST00000157599 105 ntBASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Gm17808-201ENSMUST00000200859 894 ntBASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf220Q6PDX6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Rnf220Q6PDX6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rnf220Q6PDX6 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rnf220Q6PDX6 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Rnf220Q6PDX6 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf220Q6PDX6 Gm15794-201ENSMUST00000120182 631 ntBASIC13.83□□□□□ -0.2
Rnf220Q6PDX6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Rnf220Q6PDX6 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.83□□□□□ -0.2
Rnf220Q6PDX6 Gm29518-201ENSMUST00000190858 372 ntBASIC13.83□□□□□ -0.2
Rnf220Q6PDX6 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Rnf220Q6PDX6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Rnf220Q6PDX6 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf220Q6PDX6 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf220Q6PDX6 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf220Q6PDX6 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf220Q6PDX6 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf220Q6PDX6 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf220Q6PDX6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.83□□□□□ -0.2
Rnf220Q6PDX6 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf220Q6PDX6 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf220Q6PDX6 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf220Q6PDX6 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rnf220Q6PDX6 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms