Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ShbQ6PD21 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ShbQ6PD21 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ShbQ6PD21 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ShbQ6PD21 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.54■□□□□ 0.08
ShbQ6PD21 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ShbQ6PD21 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
ShbQ6PD21 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ShbQ6PD21 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.53■□□□□ 0.08
ShbQ6PD21 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
ShbQ6PD21 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.53■□□□□ 0.08
ShbQ6PD21 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
ShbQ6PD21 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
ShbQ6PD21 Gm13342-201ENSMUST00000121055 207 ntBASIC15.53■□□□□ 0.08
ShbQ6PD21 Gm13385-201ENSMUST00000121089 220 ntBASIC15.53■□□□□ 0.08
ShbQ6PD21 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Mir5132-201ENSMUST00000175166 71 ntBASIC15.53■□□□□ 0.08
ShbQ6PD21 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
ShbQ6PD21 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.53■□□□□ 0.08
ShbQ6PD21 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.53■□□□□ 0.08
ShbQ6PD21 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
ShbQ6PD21 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ShbQ6PD21 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ShbQ6PD21 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
ShbQ6PD21 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
ShbQ6PD21 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ShbQ6PD21 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
ShbQ6PD21 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.52■□□□□ 0.08
ShbQ6PD21 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.52■□□□□ 0.08
ShbQ6PD21 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ShbQ6PD21 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.52■□□□□ 0.08
ShbQ6PD21 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ShbQ6PD21 Proscos-202ENSMUST00000178990 666 ntBASIC15.52■□□□□ 0.08
ShbQ6PD21 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.52■□□□□ 0.08
ShbQ6PD21 Gm38223-201ENSMUST00000194484 695 ntBASIC15.52■□□□□ 0.08
ShbQ6PD21 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.52■□□□□ 0.08
ShbQ6PD21 Gm44608-201ENSMUST00000206827 855 ntBASIC15.52■□□□□ 0.08
ShbQ6PD21 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ShbQ6PD21 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ShbQ6PD21 Gm18473-201ENSMUST00000220543 868 ntBASIC15.52■□□□□ 0.08
ShbQ6PD21 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
ShbQ6PD21 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
ShbQ6PD21 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ShbQ6PD21 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
ShbQ6PD21 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ShbQ6PD21 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ShbQ6PD21 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ShbQ6PD21 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
ShbQ6PD21 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ShbQ6PD21 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ShbQ6PD21 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ShbQ6PD21 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ShbQ6PD21 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ShbQ6PD21 Gm12485-201ENSMUST00000119641 291 ntBASIC15.51■□□□□ 0.07
ShbQ6PD21 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
ShbQ6PD21 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
ShbQ6PD21 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ShbQ6PD21 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.51■□□□□ 0.07
ShbQ6PD21 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ShbQ6PD21 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ShbQ6PD21 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.51■□□□□ 0.07
ShbQ6PD21 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.51■□□□□ 0.07
ShbQ6PD21 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.51■□□□□ 0.07
ShbQ6PD21 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
ShbQ6PD21 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
ShbQ6PD21 Gm29705-201ENSMUST00000212598 474 ntBASIC15.51■□□□□ 0.07
ShbQ6PD21 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ShbQ6PD21 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ShbQ6PD21 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
ShbQ6PD21 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
ShbQ6PD21 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
ShbQ6PD21 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.5■□□□□ 0.07
ShbQ6PD21 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
ShbQ6PD21 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ShbQ6PD21 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms