Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
VclQ64727 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
VclQ64727 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
VclQ64727 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VclQ64727 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
VclQ64727 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
VclQ64727 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VclQ64727 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VclQ64727 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VclQ64727 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VclQ64727 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VclQ64727 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VclQ64727 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
VclQ64727 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.33□□□□□ -0.12
VclQ64727 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VclQ64727 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.33□□□□□ -0.12
VclQ64727 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.33□□□□□ -0.12
VclQ64727 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
VclQ64727 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.33□□□□□ -0.12
VclQ64727 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VclQ64727 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.33□□□□□ -0.12
VclQ64727 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VclQ64727 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
VclQ64727 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
VclQ64727 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VclQ64727 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.33□□□□□ -0.12
VclQ64727 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VclQ64727 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VclQ64727 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
VclQ64727 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VclQ64727 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VclQ64727 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
VclQ64727 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VclQ64727 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VclQ64727 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VclQ64727 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VclQ64727 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.32□□□□□ -0.12
VclQ64727 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VclQ64727 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.32□□□□□ -0.12
VclQ64727 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VclQ64727 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.32□□□□□ -0.12
VclQ64727 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VclQ64727 Gm9824-201ENSMUST00000178707 561 ntBASIC14.32□□□□□ -0.12
VclQ64727 Gm9726-201ENSMUST00000180321 678 ntBASIC14.32□□□□□ -0.12
VclQ64727 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VclQ64727 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.32□□□□□ -0.12
VclQ64727 Gm10253-201ENSMUST00000194270 940 ntBASIC14.32□□□□□ -0.12
VclQ64727 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VclQ64727 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.32□□□□□ -0.12
VclQ64727 Gm45098-201ENSMUST00000207179 657 ntBASIC14.32□□□□□ -0.12
VclQ64727 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VclQ64727 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.32□□□□□ -0.12
VclQ64727 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VclQ64727 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VclQ64727 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VclQ64727 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VclQ64727 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
VclQ64727 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VclQ64727 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VclQ64727 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VclQ64727 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VclQ64727 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VclQ64727 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VclQ64727 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VclQ64727 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VclQ64727 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
VclQ64727 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VclQ64727 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VclQ64727 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VclQ64727 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.31□□□□□ -0.12
VclQ64727 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VclQ64727 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.31□□□□□ -0.12
VclQ64727 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.31□□□□□ -0.12
VclQ64727 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VclQ64727 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VclQ64727 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
VclQ64727 Gm8749-201ENSMUST00000117737 331 ntBASIC14.31□□□□□ -0.12
VclQ64727 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.31□□□□□ -0.12
VclQ64727 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.31□□□□□ -0.12
VclQ64727 Gm7774-201ENSMUST00000200064 533 ntBASIC14.31□□□□□ -0.12
VclQ64727 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VclQ64727 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.31□□□□□ -0.12
VclQ64727 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VclQ64727 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
VclQ64727 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VclQ64727 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VclQ64727 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
VclQ64727 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VclQ64727 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
VclQ64727 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VclQ64727 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VclQ64727 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VclQ64727 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VclQ64727 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VclQ64727 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VclQ64727 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VclQ64727 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.31□□□□□ -0.12
VclQ64727 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VclQ64727 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VclQ64727 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms