Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn1Q64347 Gm18187-201ENSMUST00000196476 984 ntBASIC18.42■□□□□ 0.54
Clcn1Q64347 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn1Q64347 Gm7390-201ENSMUST00000212452 1216 ntBASIC18.42■□□□□ 0.54
Clcn1Q64347 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn1Q64347 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn1Q64347 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn1Q64347 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn1Q64347 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn1Q64347 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn1Q64347 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn1Q64347 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn1Q64347 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn1Q64347 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clcn1Q64347 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Clcn1Q64347 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn1Q64347 Gm44291-201ENSMUST00000203102 2865 ntBASIC18.41■□□□□ 0.54
Clcn1Q64347 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn1Q64347 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn1Q64347 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn1Q64347 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Clcn1Q64347 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn1Q64347 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC18.41■□□□□ 0.54
Clcn1Q64347 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC18.41■□□□□ 0.54
Clcn1Q64347 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC18.41■□□□□ 0.54
Clcn1Q64347 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn1Q64347 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn1Q64347 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn1Q64347 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn1Q64347 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC18.41■□□□□ 0.54
Clcn1Q64347 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.41■□□□□ 0.54
Clcn1Q64347 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clcn1Q64347 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn1Q64347 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn1Q64347 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn1Q64347 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn1Q64347 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn1Q64347 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn1Q64347 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Clcn1Q64347 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC18.4■□□□□ 0.54
Clcn1Q64347 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn1Q64347 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn1Q64347 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Clcn1Q64347 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC18.4■□□□□ 0.54
Clcn1Q64347 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Clcn1Q64347 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.4■□□□□ 0.54
Clcn1Q64347 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.4■□□□□ 0.54
Clcn1Q64347 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Clcn1Q64347 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn1Q64347 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn1Q64347 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn1Q64347 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn1Q64347 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn1Q64347 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.4■□□□□ 0.54
Clcn1Q64347 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn1Q64347 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Clcn1Q64347 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn1Q64347 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn1Q64347 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Clcn1Q64347 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clcn1Q64347 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Clcn1Q64347 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Clcn1Q64347 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn1Q64347 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn1Q64347 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn1Q64347 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn1Q64347 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn1Q64347 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC18.39■□□□□ 0.53
Clcn1Q64347 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn1Q64347 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn1Q64347 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC18.39■□□□□ 0.53
Clcn1Q64347 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn1Q64347 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Clcn1Q64347 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn1Q64347 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Clcn1Q64347 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn1Q64347 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn1Q64347 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn1Q64347 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clcn1Q64347 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn1Q64347 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn1Q64347 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn1Q64347 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn1Q64347 Gm11960-202ENSMUST00000181063 2858 ntBASIC18.38■□□□□ 0.53
Clcn1Q64347 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn1Q64347 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC18.38■□□□□ 0.53
Clcn1Q64347 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn1Q64347 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn1Q64347 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn1Q64347 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.38■□□□□ 0.53
Clcn1Q64347 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC18.38■□□□□ 0.53
Clcn1Q64347 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn1Q64347 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC18.38■□□□□ 0.53
Clcn1Q64347 Gm10766-202ENSMUST00000194123 606 ntBASIC18.38■□□□□ 0.53
Clcn1Q64347 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn1Q64347 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn1Q64347 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn1Q64347 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn1Q64347 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcn1Q64347 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms