Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm22191-201ENSMUST00000103831 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm24721-201ENSMUST00000103849 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm28018-201ENSMUST00000103869 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm26399-201ENSMUST00000103937 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Six4Q61321 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.7□□□□□ -0.06
Six4Q61321 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Six4Q61321 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Six4Q61321 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.7□□□□□ -0.06
Six4Q61321 Gm25349-201ENSMUST00000177728 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm23616-201ENSMUST00000177797 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm25871-201ENSMUST00000177816 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm24752-201ENSMUST00000178240 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm24496-201ENSMUST00000178287 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm25649-201ENSMUST00000178476 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm25548-201ENSMUST00000178681 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm23147-201ENSMUST00000178841 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm26095-201ENSMUST00000179270 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm22171-201ENSMUST00000179283 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm23936-201ENSMUST00000179354 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm22619-201ENSMUST00000179516 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm25255-201ENSMUST00000179579 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm24755-201ENSMUST00000179691 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm26506-201ENSMUST00000179692 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm25086-201ENSMUST00000179931 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm23243-201ENSMUST00000180047 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm24659-201ENSMUST00000180212 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm24169-201ENSMUST00000180244 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm23689-201ENSMUST00000180354 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm27359-201ENSMUST00000184153 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm27785-201ENSMUST00000184268 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm27466-201ENSMUST00000184396 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Gm27703-201ENSMUST00000184836 110 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six4Q61321 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six4Q61321 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six4Q61321 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Six4Q61321 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.7□□□□□ -0.06
Six4Q61321 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six4Q61321 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Six4Q61321 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six4Q61321 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six4Q61321 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Six4Q61321 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six4Q61321 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.7□□□□□ -0.06
Six4Q61321 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Six4Q61321 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six4Q61321 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Six4Q61321 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Six4Q61321 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Six4Q61321 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Six4Q61321 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Six4Q61321 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Six4Q61321 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.69□□□□□ -0.06
Six4Q61321 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Six4Q61321 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Six4Q61321 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Six4Q61321 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Six4Q61321 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.69□□□□□ -0.06
Six4Q61321 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Six4Q61321 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.69□□□□□ -0.06
Six4Q61321 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Six4Q61321 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.69□□□□□ -0.06
Six4Q61321 Gm8396-201ENSMUST00000057361 823 ntBASIC14.69□□□□□ -0.06
Six4Q61321 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.69□□□□□ -0.06
Six4Q61321 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Six4Q61321 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Six4Q61321 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Six4Q61321 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Six4Q61321 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Six4Q61321 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Six4Q61321 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Six4Q61321 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Six4Q61321 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.68□□□□□ -0.06
Six4Q61321 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.68□□□□□ -0.06
Six4Q61321 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Six4Q61321 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Six4Q61321 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Six4Q61321 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.68□□□□□ -0.06
Six4Q61321 Gm29541-201ENSMUST00000191351 678 ntBASIC14.68□□□□□ -0.06
Six4Q61321 Gm5312-201ENSMUST00000203728 547 ntBASIC14.68□□□□□ -0.06
Six4Q61321 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.68□□□□□ -0.06
Six4Q61321 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Six4Q61321 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Six4Q61321 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms