Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmn1r223Q5SSA0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmn1r223Q5SSA0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmn1r223Q5SSA0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmn1r223Q5SSA0 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmn1r223Q5SSA0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vmn1r223Q5SSA0 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmn1r223Q5SSA0 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmn1r223Q5SSA0 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmn1r223Q5SSA0 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vmn1r223Q5SSA0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vmn1r223Q5SSA0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vmn1r223Q5SSA0 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vmn1r223Q5SSA0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vmn1r223Q5SSA0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vmn1r223Q5SSA0 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vmn1r223Q5SSA0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vmn1r223Q5SSA0 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Vmn1r223Q5SSA0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Vmn1r223Q5SSA0 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vmn1r223Q5SSA0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vmn1r223Q5SSA0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vmn1r223Q5SSA0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Gm6550-201ENSMUST00000187574 993 ntBASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 AV026068-213ENSMUST00000223675 1171 ntBASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vmn1r223Q5SSA0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Mir5126-201ENSMUST00000175513 77 ntBASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Gm43514-201ENSMUST00000198852 424 ntBASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
Vmn1r223Q5SSA0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vmn1r223Q5SSA0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vmn1r223Q5SSA0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Vmn1r223Q5SSA0 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vmn1r223Q5SSA0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms