Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps54Q5SPW0 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps54Q5SPW0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 AA543401-201ENSMUST00000164248 1269 ntBASIC17.49■□□□□ 0.39
Vps54Q5SPW0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Gm28630-201ENSMUST00000187806 498 ntBASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps54Q5SPW0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Gm15920-201ENSMUST00000118998 402 ntBASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Gm27430-201ENSMUST00000184585 107 ntBASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Gm44333-201ENSMUST00000197168 107 ntBASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vps54Q5SPW0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps54Q5SPW0 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.47■□□□□ 0.39
Vps54Q5SPW0 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.47■□□□□ 0.39
Vps54Q5SPW0 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps54Q5SPW0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vps54Q5SPW0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.47■□□□□ 0.39
Vps54Q5SPW0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Vps54Q5SPW0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps54Q5SPW0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.47■□□□□ 0.39
Vps54Q5SPW0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps54Q5SPW0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vps54Q5SPW0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vps54Q5SPW0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Vps54Q5SPW0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vps54Q5SPW0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Vps54Q5SPW0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps54Q5SPW0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps54Q5SPW0 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps54Q5SPW0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps54Q5SPW0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vps54Q5SPW0 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Vps54Q5SPW0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vps54Q5SPW0 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps54Q5SPW0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vps54Q5SPW0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps54Q5SPW0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps54Q5SPW0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps54Q5SPW0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vps54Q5SPW0 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms