Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv4Q5R1A3 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.04□□□□□ -0.48
Trdv4Q5R1A3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv4Q5R1A3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv4Q5R1A3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trdv4Q5R1A3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trdv4Q5R1A3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.04□□□□□ -0.48
Trdv4Q5R1A3 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv4Q5R1A3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv4Q5R1A3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv4Q5R1A3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv4Q5R1A3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv4Q5R1A3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv4Q5R1A3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv4Q5R1A3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trdv4Q5R1A3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv4Q5R1A3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv4Q5R1A3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trdv4Q5R1A3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv4Q5R1A3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv4Q5R1A3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv4Q5R1A3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trdv4Q5R1A3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Mir8117-201ENSMUST00000184773 107 ntBASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trdv4Q5R1A3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trdv4Q5R1A3 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.02□□□□□ -0.48
Trdv4Q5R1A3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trdv4Q5R1A3 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trdv4Q5R1A3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trdv4Q5R1A3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trdv4Q5R1A3 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.02□□□□□ -0.48
Trdv4Q5R1A3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.02□□□□□ -0.48
Trdv4Q5R1A3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Trdv4Q5R1A3 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trdv4Q5R1A3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trdv4Q5R1A3 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trdv4Q5R1A3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms