Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm4Q4VBF2 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm4Q4VBF2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
R3hdm4Q4VBF2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
R3hdm4Q4VBF2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm4Q4VBF2 Mir449b-201ENSMUST00000104833 80 ntBASIC15.71■□□□□ 0.11
R3hdm4Q4VBF2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.71■□□□□ 0.11
R3hdm4Q4VBF2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.71■□□□□ 0.11
R3hdm4Q4VBF2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.71■□□□□ 0.11
R3hdm4Q4VBF2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm4Q4VBF2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm4Q4VBF2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm4Q4VBF2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm4Q4VBF2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
R3hdm4Q4VBF2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm4Q4VBF2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm4Q4VBF2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
R3hdm4Q4VBF2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
R3hdm4Q4VBF2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
R3hdm4Q4VBF2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
R3hdm4Q4VBF2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
R3hdm4Q4VBF2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
R3hdm4Q4VBF2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Gm24158-201ENSMUST00000175263 71 ntBASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Gm25948-201ENSMUST00000175334 112 ntBASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
R3hdm4Q4VBF2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 Gm7774-201ENSMUST00000200064 533 ntBASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
R3hdm4Q4VBF2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
R3hdm4Q4VBF2 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
R3hdm4Q4VBF2 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
R3hdm4Q4VBF2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
R3hdm4Q4VBF2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.68■□□□□ 0.1
R3hdm4Q4VBF2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
R3hdm4Q4VBF2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
R3hdm4Q4VBF2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
R3hdm4Q4VBF2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
R3hdm4Q4VBF2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
R3hdm4Q4VBF2 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.68■□□□□ 0.1
R3hdm4Q4VBF2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
R3hdm4Q4VBF2 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
R3hdm4Q4VBF2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
R3hdm4Q4VBF2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
R3hdm4Q4VBF2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
R3hdm4Q4VBF2 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms