Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx49Q4FZF3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx49Q4FZF3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx49Q4FZF3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx49Q4FZF3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx49Q4FZF3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ddx49Q4FZF3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx49Q4FZF3 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx49Q4FZF3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx49Q4FZF3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx49Q4FZF3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx49Q4FZF3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Gm45098-201ENSMUST00000207179 657 ntBASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Gm18624-201ENSMUST00000220966 658 ntBASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Gm9797-201ENSMUST00000052902 613 ntBASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx49Q4FZF3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Gm11918-201ENSMUST00000121660 179 ntBASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Gm21854-201ENSMUST00000179901 471 ntBASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Gm28760-201ENSMUST00000185995 736 ntBASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Gm6266-201ENSMUST00000203844 806 ntBASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx49Q4FZF3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Gm45453-201ENSMUST00000211758 853 ntBASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Gm9229-201ENSMUST00000222777 126 ntBASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Gm9899-201ENSMUST00000065519 555 ntBASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ddx49Q4FZF3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms