Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf223Q3UV31 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Gm45453-201ENSMUST00000211758 853 ntBASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Gm16476-201ENSMUST00000221544 139 ntBASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Dupd1-202ENSMUST00000224735 548 ntBASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf223Q3UV31 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 Mir8102-201ENSMUST00000184148 139 ntBASIC14.12□□□□□ -0.15
Rnf223Q3UV31 Gm27321-201ENSMUST00000185021 205 ntBASIC14.12□□□□□ -0.15
Rnf223Q3UV31 Gm7775-201ENSMUST00000218871 853 ntBASIC14.12□□□□□ -0.15
Rnf223Q3UV31 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Rnf223Q3UV31 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Gm12428-201ENSMUST00000119844 727 ntBASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Thoc7-209ENSMUST00000225325 765 ntBASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms