Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Col5a2Q3U962 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a2Q3U962 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a2Q3U962 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a2Q3U962 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a2Q3U962 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col5a2Q3U962 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a2Q3U962 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.06■□□□□ 0.32
Col5a2Q3U962 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC17.06■□□□□ 0.32
Col5a2Q3U962 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC17.06■□□□□ 0.32
Col5a2Q3U962 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Gm43118-201ENSMUST00000199149 775 ntBASIC17.06■□□□□ 0.32
Col5a2Q3U962 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.06■□□□□ 0.32
Col5a2Q3U962 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col5a2Q3U962 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Gm13689-201ENSMUST00000119360 685 ntBASIC17.05■□□□□ 0.32
Col5a2Q3U962 Gm8801-201ENSMUST00000173255 1064 ntBASIC17.05■□□□□ 0.32
Col5a2Q3U962 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC17.05■□□□□ 0.32
Col5a2Q3U962 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Gm5370-201ENSMUST00000187187 574 ntBASIC17.05■□□□□ 0.32
Col5a2Q3U962 Gm43094-201ENSMUST00000196549 921 ntBASIC17.05■□□□□ 0.32
Col5a2Q3U962 Gm6983-201ENSMUST00000214912 628 ntBASIC17.05■□□□□ 0.32
Col5a2Q3U962 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC17.05■□□□□ 0.32
Col5a2Q3U962 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.05■□□□□ 0.32
Col5a2Q3U962 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Col5a2Q3U962 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Gm12416-201ENSMUST00000120911 1008 ntBASIC17.05■□□□□ 0.32
Col5a2Q3U962 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Gm5276-201ENSMUST00000196683 1047 ntBASIC17.05■□□□□ 0.32
Col5a2Q3U962 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC17.05■□□□□ 0.32
Col5a2Q3U962 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col5a2Q3U962 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col5a2Q3U962 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col5a2Q3U962 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col5a2Q3U962 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.04■□□□□ 0.32
Col5a2Q3U962 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col5a2Q3U962 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.04■□□□□ 0.32
Col5a2Q3U962 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col5a2Q3U962 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Col5a2Q3U962 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col5a2Q3U962 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col5a2Q3U962 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Col5a2Q3U962 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms