Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp25Q3U435 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Mmp25Q3U435 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Mmp25Q3U435 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Mmp25Q3U435 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp25Q3U435 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp25Q3U435 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp25Q3U435 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.72□□□□□ -0.21
Mmp25Q3U435 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp25Q3U435 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp25Q3U435 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp25Q3U435 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp25Q3U435 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp25Q3U435 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp25Q3U435 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp25Q3U435 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp25Q3U435 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp25Q3U435 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Mmp25Q3U435 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp25Q3U435 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp25Q3U435 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp25Q3U435 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp25Q3U435 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp25Q3U435 Gm13015-201ENSMUST00000118674 204 ntBASIC13.71□□□□□ -0.21
Mmp25Q3U435 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.71□□□□□ -0.21
Mmp25Q3U435 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp25Q3U435 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp25Q3U435 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Mmp25Q3U435 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp25Q3U435 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp25Q3U435 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Mmp25Q3U435 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp25Q3U435 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp25Q3U435 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp25Q3U435 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Mmp25Q3U435 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Mmp25Q3U435 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Mmp25Q3U435 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Mmp25Q3U435 Carlr-201ENSMUST00000181515 2574 ntBASIC13.71□□□□□ -0.22
Mmp25Q3U435 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Mmp25Q3U435 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.7□□□□□ -0.22
Mmp25Q3U435 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.7□□□□□ -0.22
Mmp25Q3U435 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Gm14042-201ENSMUST00000120139 833 ntBASIC13.7□□□□□ -0.22
Mmp25Q3U435 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.7□□□□□ -0.22
Mmp25Q3U435 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp25Q3U435 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.69□□□□□ -0.22
Mmp25Q3U435 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.69□□□□□ -0.22
Mmp25Q3U435 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Mmp25Q3U435 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.69□□□□□ -0.22
Mmp25Q3U435 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp25Q3U435 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp25Q3U435 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp25Q3U435 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.69□□□□□ -0.22
Mmp25Q3U435 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Mmp25Q3U435 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp25Q3U435 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp25Q3U435 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.69□□□□□ -0.22
Mmp25Q3U435 Gm25948-201ENSMUST00000175334 112 ntBASIC13.69□□□□□ -0.22
Mmp25Q3U435 Gm27430-201ENSMUST00000184585 107 ntBASIC13.69□□□□□ -0.22
Mmp25Q3U435 Gm44333-201ENSMUST00000197168 107 ntBASIC13.69□□□□□ -0.22
Mmp25Q3U435 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp25Q3U435 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.69□□□□□ -0.22
Mmp25Q3U435 Gm5779-201ENSMUST00000218467 910 ntBASIC13.69□□□□□ -0.22
Mmp25Q3U435 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp25Q3U435 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.69□□□□□ -0.22
Mmp25Q3U435 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.69□□□□□ -0.22
Mmp25Q3U435 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp25Q3U435 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.69□□□□□ -0.22
Mmp25Q3U435 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Mmp25Q3U435 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp25Q3U435 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp25Q3U435 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp25Q3U435 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Mmp25Q3U435 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms