Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lins1Q3U1D0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lins1Q3U1D0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lins1Q3U1D0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.31■□□□□ 0.36
Lins1Q3U1D0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lins1Q3U1D0 Syt7-204ENSMUST00000223586 1344 ntBASIC17.31■□□□□ 0.36
Lins1Q3U1D0 Gm13464-201ENSMUST00000119418 935 ntBASIC17.31■□□□□ 0.36
Lins1Q3U1D0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.31■□□□□ 0.36
Lins1Q3U1D0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Lins1Q3U1D0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lins1Q3U1D0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lins1Q3U1D0 Gm27838-201ENSMUST00000184829 128 ntBASIC17.31■□□□□ 0.36
Lins1Q3U1D0 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.31■□□□□ 0.36
Lins1Q3U1D0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lins1Q3U1D0 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lins1Q3U1D0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lins1Q3U1D0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lins1Q3U1D0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lins1Q3U1D0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lins1Q3U1D0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Lins1Q3U1D0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lins1Q3U1D0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lins1Q3U1D0 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lins1Q3U1D0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Lins1Q3U1D0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lins1Q3U1D0 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lins1Q3U1D0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lins1Q3U1D0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lins1Q3U1D0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lins1Q3U1D0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lins1Q3U1D0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Lins1Q3U1D0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lins1Q3U1D0 Gm7488-201ENSMUST00000117148 684 ntBASIC17.3■□□□□ 0.36
Lins1Q3U1D0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.3■□□□□ 0.36
Lins1Q3U1D0 Gm45098-201ENSMUST00000207179 657 ntBASIC17.3■□□□□ 0.36
Lins1Q3U1D0 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.3■□□□□ 0.36
Lins1Q3U1D0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Lins1Q3U1D0 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.3■□□□□ 0.36
Lins1Q3U1D0 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lins1Q3U1D0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lins1Q3U1D0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lins1Q3U1D0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lins1Q3U1D0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lins1Q3U1D0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lins1Q3U1D0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Gm16215-201ENSMUST00000161990 637 ntBASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lins1Q3U1D0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lins1Q3U1D0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lins1Q3U1D0 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lins1Q3U1D0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lins1Q3U1D0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lins1Q3U1D0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lins1Q3U1D0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lins1Q3U1D0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lins1Q3U1D0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lins1Q3U1D0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lins1Q3U1D0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lins1Q3U1D0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lins1Q3U1D0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lins1Q3U1D0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lins1Q3U1D0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lins1Q3U1D0 Gm11424-201ENSMUST00000121929 829 ntBASIC17.28■□□□□ 0.36
Lins1Q3U1D0 Gm12134-201ENSMUST00000122109 520 ntBASIC17.28■□□□□ 0.36
Lins1Q3U1D0 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms