Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Gm25255-201ENSMUST00000179579 110 ntBASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 Gm24755-201ENSMUST00000179691 110 ntBASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 Gm26506-201ENSMUST00000179692 110 ntBASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 Gm25086-201ENSMUST00000179931 110 ntBASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 Gm23243-201ENSMUST00000180047 110 ntBASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 Gm24659-201ENSMUST00000180212 110 ntBASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 Gm24169-201ENSMUST00000180244 110 ntBASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 Gm23689-201ENSMUST00000180354 110 ntBASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 Gm27359-201ENSMUST00000184153 110 ntBASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 Gm27785-201ENSMUST00000184268 110 ntBASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 Gm27466-201ENSMUST00000184396 110 ntBASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 Gm27703-201ENSMUST00000184836 110 ntBASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 Gm5779-201ENSMUST00000218467 910 ntBASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.88□□□□□ -0.19
Khdc4Q3TCX3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Gm6973-201ENSMUST00000117080 721 ntBASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Khdc4Q3TCX3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Khdc4Q3TCX3 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.85□□□□□ -0.19
Khdc4Q3TCX3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Khdc4Q3TCX3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms