Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm45684-201ENSMUST00000210244 1571 ntBASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Gm5687-201ENSMUST00000118252 640 ntBASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Gm12948-201ENSMUST00000119406 682 ntBASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC7.57□□□□□ -1.2
Ush2AQ2QI47 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Gm11801-201ENSMUST00000117807 746 ntBASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Gm11400-201ENSMUST00000120853 1214 ntBASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC7.56□□□□□ -1.2
Ush2AQ2QI47 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Gm37922-201ENSMUST00000195596 455 ntBASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Gm13097-201ENSMUST00000210722 397 ntBASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Gm2824-203ENSMUST00000226189 1228 ntBASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Gm16481-201ENSMUST00000119074 1227 ntBASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Gm12485-201ENSMUST00000119641 291 ntBASIC7.56□□□□□ -1.2
Ush2AQ2QI47 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Gm42929-201ENSMUST00000198374 1286 ntBASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Gm12286-201ENSMUST00000119246 1002 ntBASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC7.56□□□□□ -1.2
Ush2AQ2QI47 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 AC115863.1-201ENSMUST00000214815 1813 ntBASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Mxra8os-201ENSMUST00000097740 687 ntBASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ush2AQ2QI47 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms