Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ptchd3Q0EEE2 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Gm15173-201ENSMUST00000122049 433 ntBASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Mir8098-201ENSMUST00000184011 137 ntBASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ptchd3Q0EEE2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ptchd3Q0EEE2 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ptchd3Q0EEE2 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ptchd3Q0EEE2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ptchd3Q0EEE2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ptchd3Q0EEE2 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms