Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm6023-201ENSMUST00000118217 606 ntBASIC12.91□□□□□ -0.34
Chd8Q09XV5 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.91□□□□□ -0.34
Chd8Q09XV5 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd8Q09XV5 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chd8Q09XV5 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.91□□□□□ -0.34
Chd8Q09XV5 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Gm38144-201ENSMUST00000192790 465 ntBASIC12.91□□□□□ -0.34
Chd8Q09XV5 Gm18473-201ENSMUST00000220543 868 ntBASIC12.91□□□□□ -0.34
Chd8Q09XV5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chd8Q09XV5 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chd8Q09XV5 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.91□□□□□ -0.34
Chd8Q09XV5 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Gm15460-201ENSMUST00000118147 391 ntBASIC12.9□□□□□ -0.34
Chd8Q09XV5 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.9□□□□□ -0.34
Chd8Q09XV5 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.9□□□□□ -0.34
Chd8Q09XV5 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chd8Q09XV5 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.9□□□□□ -0.34
Chd8Q09XV5 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.9□□□□□ -0.34
Chd8Q09XV5 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chd8Q09XV5 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Gm18730-201ENSMUST00000218038 343 ntBASIC12.9□□□□□ -0.34
Chd8Q09XV5 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Chd8Q09XV5 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chd8Q09XV5 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Chd8Q09XV5 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Gm44100-201ENSMUST00000204329 436 ntBASIC12.89□□□□□ -0.35
Chd8Q09XV5 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Gm11667-201ENSMUST00000119828 486 ntBASIC12.89□□□□□ -0.35
Chd8Q09XV5 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.89□□□□□ -0.35
Chd8Q09XV5 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.89□□□□□ -0.35
Chd8Q09XV5 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms