Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Thbs3Q05895 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Thbs3Q05895 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Thbs3Q05895 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thbs3Q05895 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thbs3Q05895 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thbs3Q05895 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Thbs3Q05895 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Thbs3Q05895 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Thbs3Q05895 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thbs3Q05895 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.79□□□□□ -0.36
Thbs3Q05895 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thbs3Q05895 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thbs3Q05895 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thbs3Q05895 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thbs3Q05895 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thbs3Q05895 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thbs3Q05895 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.79□□□□□ -0.36
Thbs3Q05895 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thbs3Q05895 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thbs3Q05895 Gm14042-201ENSMUST00000120139 833 ntBASIC12.79□□□□□ -0.36
Thbs3Q05895 Gm11745-201ENSMUST00000121669 448 ntBASIC12.79□□□□□ -0.36
Thbs3Q05895 Gm23547-201ENSMUST00000158210 271 ntBASIC12.79□□□□□ -0.36
Thbs3Q05895 Gm2756-201ENSMUST00000195851 400 ntBASIC12.79□□□□□ -0.36
Thbs3Q05895 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.79□□□□□ -0.36
Thbs3Q05895 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thbs3Q05895 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thbs3Q05895 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Thbs3Q05895 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thbs3Q05895 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thbs3Q05895 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Thbs3Q05895 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thbs3Q05895 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Thbs3Q05895 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Thbs3Q05895 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Thbs3Q05895 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thbs3Q05895 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thbs3Q05895 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Thbs3Q05895 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thbs3Q05895 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thbs3Q05895 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Thbs3Q05895 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thbs3Q05895 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thbs3Q05895 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Thbs3Q05895 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thbs3Q05895 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thbs3Q05895 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Thbs3Q05895 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.78□□□□□ -0.36
Thbs3Q05895 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thbs3Q05895 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.78□□□□□ -0.36
Thbs3Q05895 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.78□□□□□ -0.36
Thbs3Q05895 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Thbs3Q05895 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thbs3Q05895 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thbs3Q05895 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.78□□□□□ -0.36
Thbs3Q05895 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thbs3Q05895 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Thbs3Q05895 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thbs3Q05895 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Thbs3Q05895 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Thbs3Q05895 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.78□□□□□ -0.36
Thbs3Q05895 Gm37230-201ENSMUST00000194491 818 ntBASIC12.78□□□□□ -0.36
Thbs3Q05895 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.78□□□□□ -0.36
Thbs3Q05895 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Thbs3Q05895 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.78□□□□□ -0.36
Thbs3Q05895 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.78□□□□□ -0.36
Thbs3Q05895 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thbs3Q05895 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Thbs3Q05895 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Thbs3Q05895 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thbs3Q05895 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.78□□□□□ -0.36
Thbs3Q05895 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Thbs3Q05895 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Thbs3Q05895 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thbs3Q05895 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.78□□□□□ -0.36
Thbs3Q05895 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Thbs3Q05895 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thbs3Q05895 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thbs3Q05895 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Thbs3Q05895 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Thbs3Q05895 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Thbs3Q05895 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.78□□□□□ -0.36
Thbs3Q05895 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Thbs3Q05895 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Thbs3Q05895 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.77□□□□□ -0.36
Thbs3Q05895 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Thbs3Q05895 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Thbs3Q05895 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.77□□□□□ -0.36
Thbs3Q05895 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Thbs3Q05895 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Thbs3Q05895 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Thbs3Q05895 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Thbs3Q05895 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Thbs3Q05895 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Thbs3Q05895 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Thbs3Q05895 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Thbs3Q05895 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Thbs3Q05895 Gm2810-201ENSMUST00000118681 990 ntBASIC12.77□□□□□ -0.37
Thbs3Q05895 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.77□□□□□ -0.37
Thbs3Q05895 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms