Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc1P97496 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC18.15■□□□□ 0.5
Smarcc1P97496 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc1P97496 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC18.15■□□□□ 0.5
Smarcc1P97496 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC18.15■□□□□ 0.5
Smarcc1P97496 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc1P97496 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc1P97496 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Smarcc1P97496 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc1P97496 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Smarcc1P97496 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc1P97496 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Smarcc1P97496 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc1P97496 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Smarcc1P97496 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc1P97496 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc1P97496 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc1P97496 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarcc1P97496 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Smarcc1P97496 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcc1P97496 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcc1P97496 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcc1P97496 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcc1P97496 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcc1P97496 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcc1P97496 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Smarcc1P97496 Gm5303-201ENSMUST00000117943 1252 ntBASIC18.14■□□□□ 0.49
Smarcc1P97496 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC18.14■□□□□ 0.49
Smarcc1P97496 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcc1P97496 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC18.14■□□□□ 0.49
Smarcc1P97496 Mir1982-201ENSMUST00000157368 74 ntBASIC18.14■□□□□ 0.49
Smarcc1P97496 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC18.14■□□□□ 0.49
Smarcc1P97496 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC18.14■□□□□ 0.49
Smarcc1P97496 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC18.14■□□□□ 0.49
Smarcc1P97496 AC123645.1-201ENSMUST00000228469 605 ntBASIC18.14■□□□□ 0.49
Smarcc1P97496 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcc1P97496 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Smarcc1P97496 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcc1P97496 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Smarcc1P97496 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC18.14■□□□□ 0.49
Smarcc1P97496 Gm21009-201ENSMUST00000197169 1669 ntBASIC18.14■□□□□ 0.49
Smarcc1P97496 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcc1P97496 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcc1P97496 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcc1P97496 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcc1P97496 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcc1P97496 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcc1P97496 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcc1P97496 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Smarcc1P97496 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcc1P97496 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcc1P97496 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcc1P97496 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc1P97496 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc1P97496 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.13■□□□□ 0.49
Smarcc1P97496 Gm14452-201ENSMUST00000118680 1632 ntBASIC18.13■□□□□ 0.49
Smarcc1P97496 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc1P97496 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc1P97496 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc1P97496 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc1P97496 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC18.13■□□□□ 0.49
Smarcc1P97496 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Smarcc1P97496 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC18.13■□□□□ 0.49
Smarcc1P97496 Mir7654-201ENSMUST00000185082 70 ntBASIC18.13■□□□□ 0.49
Smarcc1P97496 AC153872.1-201ENSMUST00000199539 128 ntBASIC18.13■□□□□ 0.49
Smarcc1P97496 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc1P97496 Gm5356-201ENSMUST00000093326 615 ntBASIC18.13■□□□□ 0.49
Smarcc1P97496 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc1P97496 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Smarcc1P97496 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Smarcc1P97496 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc1P97496 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc1P97496 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc1P97496 AC114008.2-201ENSMUST00000227699 1347 ntBASIC18.13■□□□□ 0.49
Smarcc1P97496 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc1P97496 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc1P97496 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc1P97496 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc1P97496 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc1P97496 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Smarcc1P97496 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcc1P97496 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcc1P97496 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcc1P97496 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC18.12■□□□□ 0.49
Smarcc1P97496 Gm7558-201ENSMUST00000193221 1165 ntBASIC18.12■□□□□ 0.49
Smarcc1P97496 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC18.12■□□□□ 0.49
Smarcc1P97496 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC18.12■□□□□ 0.49
Smarcc1P97496 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Smarcc1P97496 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcc1P97496 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Smarcc1P97496 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcc1P97496 AC154527.2-201ENSMUST00000225256 1466 ntBASIC18.12■□□□□ 0.49
Smarcc1P97496 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcc1P97496 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcc1P97496 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcc1P97496 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Smarcc1P97496 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.11■□□□□ 0.49
Smarcc1P97496 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.11■□□□□ 0.49
Smarcc1P97496 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcc1P97496 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms