Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3f3aP84244 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3f3aP84244 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
H3f3aP84244 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3f3aP84244 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3f3aP84244 Gm23935-201ENSMUST00000102303 57 ntBASIC12.98□□□□□ -0.33
H3f3aP84244 Gm24270-201ENSMUST00000102326 57 ntBASIC12.98□□□□□ -0.33
H3f3aP84244 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.98□□□□□ -0.33
H3f3aP84244 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3f3aP84244 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.98□□□□□ -0.33
H3f3aP84244 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
H3f3aP84244 Gm24245-201ENSMUST00000157318 57 ntBASIC12.98□□□□□ -0.33
H3f3aP84244 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
H3f3aP84244 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.98□□□□□ -0.33
H3f3aP84244 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.98□□□□□ -0.33
H3f3aP84244 Mir6990-201ENSMUST00000183724 91 ntBASIC12.98□□□□□ -0.33
H3f3aP84244 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3f3aP84244 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3f3aP84244 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
H3f3aP84244 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
H3f3aP84244 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
H3f3aP84244 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3f3aP84244 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3f3aP84244 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3f3aP84244 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3f3aP84244 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
H3f3aP84244 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
H3f3aP84244 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3f3aP84244 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3f3aP84244 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.98□□□□□ -0.33
H3f3aP84244 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.98□□□□□ -0.33
H3f3aP84244 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3f3aP84244 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3f3aP84244 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
H3f3aP84244 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.97□□□□□ -0.33
H3f3aP84244 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
H3f3aP84244 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
H3f3aP84244 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
H3f3aP84244 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.97□□□□□ -0.33
H3f3aP84244 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 Gm43575-201ENSMUST00000196420 516 ntBASIC12.97□□□□□ -0.33
H3f3aP84244 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.97□□□□□ -0.33
H3f3aP84244 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
H3f3aP84244 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H3f3aP84244 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
H3f3aP84244 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3f3aP84244 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.96□□□□□ -0.33
H3f3aP84244 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3f3aP84244 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3f3aP84244 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
H3f3aP84244 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3f3aP84244 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.96□□□□□ -0.33
H3f3aP84244 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
H3f3aP84244 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3f3aP84244 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3f3aP84244 Gm37230-201ENSMUST00000194491 818 ntBASIC12.96□□□□□ -0.33
H3f3aP84244 Gm44335-201ENSMUST00000196879 141 ntBASIC12.96□□□□□ -0.33
H3f3aP84244 Gm44297-201ENSMUST00000198304 141 ntBASIC12.96□□□□□ -0.33
H3f3aP84244 Gm44346-201ENSMUST00000198851 141 ntBASIC12.96□□□□□ -0.33
H3f3aP84244 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3f3aP84244 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3f3aP84244 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3f3aP84244 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
H3f3aP84244 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.96□□□□□ -0.33
H3f3aP84244 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
H3f3aP84244 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
H3f3aP84244 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.96□□□□□ -0.34
H3f3aP84244 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
H3f3aP84244 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H3f3aP84244 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H3f3aP84244 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
H3f3aP84244 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
H3f3aP84244 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
H3f3aP84244 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
H3f3aP84244 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H3f3aP84244 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H3f3aP84244 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms