Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Stra8P70278 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Stra8P70278 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Stra8P70278 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Stra8P70278 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Stra8P70278 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Stra8P70278 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Stra8P70278 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Stra8P70278 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Stra8P70278 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Stra8P70278 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Stra8P70278 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Stra8P70278 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Stra8P70278 Gm45167-201ENSMUST00000208007 322 ntBASIC20.13■□□□□ 0.81
Stra8P70278 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Stra8P70278 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Stra8P70278 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Stra8P70278 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Stra8P70278 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Stra8P70278 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Stra8P70278 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Stra8P70278 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Stra8P70278 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Stra8P70278 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Stra8P70278 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Stra8P70278 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Stra8P70278 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Stra8P70278 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Stra8P70278 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Stra8P70278 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Stra8P70278 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Stra8P70278 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Stra8P70278 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Stra8P70278 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Stra8P70278 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Stra8P70278 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Stra8P70278 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Stra8P70278 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Stra8P70278 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Stra8P70278 Gm13036-201ENSMUST00000117799 748 ntBASIC20.12■□□□□ 0.81
Stra8P70278 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.12■□□□□ 0.81
Stra8P70278 Gm5253-201ENSMUST00000187104 1025 ntBASIC20.12■□□□□ 0.81
Stra8P70278 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Stra8P70278 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Stra8P70278 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Stra8P70278 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Stra8P70278 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Stra8P70278 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Stra8P70278 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Stra8P70278 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Stra8P70278 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Stra8P70278 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Stra8P70278 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Stra8P70278 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Stra8P70278 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Stra8P70278 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Stra8P70278 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Stra8P70278 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Stra8P70278 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Stra8P70278 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Stra8P70278 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Stra8P70278 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Stra8P70278 Gm11453-201ENSMUST00000117318 1007 ntBASIC20.11■□□□□ 0.81
Stra8P70278 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC20.11■□□□□ 0.81
Stra8P70278 Gm10499-201ENSMUST00000174094 934 ntBASIC20.11■□□□□ 0.81
Stra8P70278 Mir5126-201ENSMUST00000175513 77 ntBASIC20.11■□□□□ 0.81
Stra8P70278 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Stra8P70278 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Stra8P70278 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC20.11■□□□□ 0.81
Stra8P70278 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Stra8P70278 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Stra8P70278 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Stra8P70278 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Stra8P70278 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Stra8P70278 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Stra8P70278 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
Stra8P70278 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Stra8P70278 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Stra8P70278 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Stra8P70278 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC20.1■□□□□ 0.81
Stra8P70278 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Stra8P70278 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Stra8P70278 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Stra8P70278 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Stra8P70278 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Stra8P70278 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Stra8P70278 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Stra8P70278 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Stra8P70278 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC20.1■□□□□ 0.81
Stra8P70278 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Stra8P70278 Gm12350-201ENSMUST00000121208 462 ntBASIC20.1■□□□□ 0.81
Stra8P70278 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Stra8P70278 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Stra8P70278 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Stra8P70278 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC20.1■□□□□ 0.81
Stra8P70278 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC20.1■□□□□ 0.81
Stra8P70278 Gm9682-201ENSMUST00000197505 556 ntBASIC20.1■□□□□ 0.81
Stra8P70278 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC20.1■□□□□ 0.81
Stra8P70278 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Stra8P70278 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms