Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Six5P70178 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.64□□□□□ -0.23
Six5P70178 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.64□□□□□ -0.23
Six5P70178 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six5P70178 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six5P70178 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six5P70178 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six5P70178 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six5P70178 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six5P70178 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Six5P70178 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.64□□□□□ -0.23
Six5P70178 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six5P70178 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Six5P70178 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six5P70178 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.64□□□□□ -0.23
Six5P70178 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Six5P70178 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Six5P70178 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six5P70178 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.64□□□□□ -0.23
Six5P70178 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six5P70178 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Six5P70178 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Six5P70178 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Six5P70178 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.64□□□□□ -0.23
Six5P70178 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.64□□□□□ -0.23
Six5P70178 Gm15483-201ENSMUST00000120338 456 ntBASIC13.64□□□□□ -0.23
Six5P70178 Rprl2-201ENSMUST00000157150 290 ntBASIC13.64□□□□□ -0.23
Six5P70178 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.64□□□□□ -0.23
Six5P70178 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Six5P70178 Gm27920-201ENSMUST00000183953 96 ntBASIC13.64□□□□□ -0.23
Six5P70178 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.64□□□□□ -0.23
Six5P70178 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.64□□□□□ -0.23
Six5P70178 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.64□□□□□ -0.23
Six5P70178 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
Six5P70178 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six5P70178 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Six5P70178 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Six5P70178 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six5P70178 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six5P70178 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Six5P70178 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six5P70178 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six5P70178 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six5P70178 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.64□□□□□ -0.23
Six5P70178 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.64□□□□□ -0.23
Six5P70178 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six5P70178 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Six5P70178 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six5P70178 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six5P70178 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.63□□□□□ -0.23
Six5P70178 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six5P70178 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.63□□□□□ -0.23
Six5P70178 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Six5P70178 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Six5P70178 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Six5P70178 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six5P70178 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Six5P70178 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six5P70178 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Six5P70178 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six5P70178 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six5P70178 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Six5P70178 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.63□□□□□ -0.23
Six5P70178 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Six5P70178 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Six5P70178 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Six5P70178 Gm2756-201ENSMUST00000195851 400 ntBASIC13.63□□□□□ -0.23
Six5P70178 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Six5P70178 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six5P70178 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six5P70178 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six5P70178 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Six5P70178 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Six5P70178 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six5P70178 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six5P70178 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.63□□□□□ -0.23
Six5P70178 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six5P70178 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Six5P70178 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six5P70178 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six5P70178 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.63□□□□□ -0.23
Six5P70178 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Six5P70178 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Six5P70178 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Six5P70178 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.62□□□□□ -0.23
Six5P70178 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.62□□□□□ -0.23
Six5P70178 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Six5P70178 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Six5P70178 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Six5P70178 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Six5P70178 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Six5P70178 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Six5P70178 Gm4995-201ENSMUST00000117247 432 ntBASIC13.62□□□□□ -0.23
Six5P70178 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.62□□□□□ -0.23
Six5P70178 Gm14042-201ENSMUST00000120139 833 ntBASIC13.62□□□□□ -0.23
Six5P70178 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.62□□□□□ -0.23
Six5P70178 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Six5P70178 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.62□□□□□ -0.23
Six5P70178 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Six5P70178 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms