Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm3P62311 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Lsm3P62311 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Lsm3P62311 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm3P62311 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm3P62311 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm3P62311 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm3P62311 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm3P62311 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm3P62311 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm3P62311 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm3P62311 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Lsm3P62311 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Lsm3P62311 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm3P62311 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm3P62311 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.3□□□□□ -0.28
Lsm3P62311 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm3P62311 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm3P62311 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Lsm3P62311 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm3P62311 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm3P62311 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.3□□□□□ -0.28
Lsm3P62311 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm3P62311 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.3□□□□□ -0.28
Lsm3P62311 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Lsm3P62311 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.3□□□□□ -0.28
Lsm3P62311 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.3□□□□□ -0.28
Lsm3P62311 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.3□□□□□ -0.28
Lsm3P62311 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm3P62311 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Lsm3P62311 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm3P62311 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm3P62311 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm3P62311 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm3P62311 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.3□□□□□ -0.28
Lsm3P62311 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.3□□□□□ -0.28
Lsm3P62311 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Lsm3P62311 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm3P62311 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Lsm3P62311 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Lsm3P62311 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Lsm3P62311 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.29□□□□□ -0.28
Lsm3P62311 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Lsm3P62311 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.29□□□□□ -0.28
Lsm3P62311 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.29□□□□□ -0.28
Lsm3P62311 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.29□□□□□ -0.28
Lsm3P62311 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.29□□□□□ -0.28
Lsm3P62311 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.29□□□□□ -0.28
Lsm3P62311 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.29□□□□□ -0.28
Lsm3P62311 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Lsm3P62311 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm3P62311 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.28□□□□□ -0.28
Lsm3P62311 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Lsm3P62311 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm3P62311 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm3P62311 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm3P62311 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm3P62311 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Lsm3P62311 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm3P62311 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Lsm3P62311 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm3P62311 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm3P62311 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Lsm3P62311 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm3P62311 Gm5417-201ENSMUST00000079706 384 ntBASIC13.28□□□□□ -0.28
Lsm3P62311 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm3P62311 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.28□□□□□ -0.28
Lsm3P62311 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm3P62311 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.28□□□□□ -0.28
Lsm3P62311 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm3P62311 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm3P62311 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm3P62311 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm3P62311 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Lsm3P62311 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms