Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nphp4P59240 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nphp4P59240 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nphp4P59240 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC19.57■□□□□ 0.72
Nphp4P59240 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC19.57■□□□□ 0.72
Nphp4P59240 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nphp4P59240 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nphp4P59240 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nphp4P59240 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nphp4P59240 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nphp4P59240 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nphp4P59240 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nphp4P59240 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nphp4P59240 AC154527.2-201ENSMUST00000225256 1466 ntBASIC19.56■□□□□ 0.72
Nphp4P59240 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nphp4P59240 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nphp4P59240 Gm12341-201ENSMUST00000119724 503 ntBASIC19.56■□□□□ 0.72
Nphp4P59240 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC19.56■□□□□ 0.72
Nphp4P59240 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC19.56■□□□□ 0.72
Nphp4P59240 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nphp4P59240 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC19.56■□□□□ 0.72
Nphp4P59240 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nphp4P59240 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nphp4P59240 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Nphp4P59240 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nphp4P59240 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nphp4P59240 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nphp4P59240 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC19.56■□□□□ 0.72
Nphp4P59240 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nphp4P59240 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nphp4P59240 Gm15163-201ENSMUST00000120749 1302 ntBASIC19.55■□□□□ 0.72
Nphp4P59240 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nphp4P59240 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nphp4P59240 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nphp4P59240 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nphp4P59240 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nphp4P59240 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC19.55■□□□□ 0.72
Nphp4P59240 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nphp4P59240 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nphp4P59240 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nphp4P59240 AC159006.1-201ENSMUST00000226396 258 ntBASIC19.55■□□□□ 0.72
Nphp4P59240 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nphp4P59240 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nphp4P59240 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nphp4P59240 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp4P59240 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp4P59240 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp4P59240 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
Nphp4P59240 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp4P59240 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC19.54■□□□□ 0.72
Nphp4P59240 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC19.54■□□□□ 0.72
Nphp4P59240 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC19.54■□□□□ 0.72
Nphp4P59240 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Nphp4P59240 Gm17795-201ENSMUST00000214505 757 ntBASIC19.54■□□□□ 0.72
Nphp4P59240 AC155286.1-201ENSMUST00000218632 448 ntBASIC19.54■□□□□ 0.72
Nphp4P59240 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Nphp4P59240 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Nphp4P59240 AC159196.2-201ENSMUST00000224082 1622 ntBASIC19.54■□□□□ 0.72
Nphp4P59240 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp4P59240 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp4P59240 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp4P59240 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp4P59240 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp4P59240 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp4P59240 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp4P59240 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp4P59240 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nphp4P59240 Fbxl12-205ENSMUST00000140702 1555 ntBASIC19.53■□□□□ 0.72
Nphp4P59240 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Nphp4P59240 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp4P59240 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp4P59240 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC19.53■□□□□ 0.72
Nphp4P59240 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp4P59240 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC19.53■□□□□ 0.72
Nphp4P59240 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp4P59240 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
Nphp4P59240 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Nphp4P59240 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Nphp4P59240 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp4P59240 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp4P59240 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp4P59240 AC121801.1-201ENSMUST00000225363 1899 ntBASIC19.53■□□□□ 0.72
Nphp4P59240 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp4P59240 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp4P59240 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp4P59240 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
Nphp4P59240 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp4P59240 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp4P59240 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp4P59240 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp4P59240 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Nphp4P59240 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Nphp4P59240 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Nphp4P59240 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nphp4P59240 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC19.52■□□□□ 0.72
Nphp4P59240 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nphp4P59240 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC19.52■□□□□ 0.72
Nphp4P59240 Mir7654-201ENSMUST00000185082 70 ntBASIC19.52■□□□□ 0.72
Nphp4P59240 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC19.52■□□□□ 0.72
Nphp4P59240 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms