Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubgcp3P58854 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubgcp3P58854 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubgcp3P58854 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubgcp3P58854 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubgcp3P58854 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubgcp3P58854 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Tubgcp3P58854 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubgcp3P58854 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubgcp3P58854 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubgcp3P58854 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tubgcp3P58854 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Tubgcp3P58854 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Gm9385-201ENSMUST00000117563 472 ntBASIC14.88□□□□□ -0.03
Tubgcp3P58854 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Tubgcp3P58854 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.88□□□□□ -0.03
Tubgcp3P58854 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tubgcp3P58854 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tubgcp3P58854 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.87□□□□□ -0.03
Tubgcp3P58854 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.87□□□□□ -0.03
Tubgcp3P58854 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Tubgcp3P58854 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.87□□□□□ -0.03
Tubgcp3P58854 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Tubgcp3P58854 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tubgcp3P58854 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tubgcp3P58854 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tubgcp3P58854 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tubgcp3P58854 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tubgcp3P58854 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Tubgcp3P58854 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tubgcp3P58854 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms