Protein–RNA interactions for Protein: P58404

Strn4, Striatin-4, mousemouse

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Strn4P58404 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Strn4P58404 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Strn4P58404 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC18.3■□□□□ 0.52
Strn4P58404 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Strn4P58404 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.3■□□□□ 0.52
Strn4P58404 Gm12091-201ENSMUST00000146791 830 ntBASIC18.3■□□□□ 0.52
Strn4P58404 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.3■□□□□ 0.52
Strn4P58404 Gm2451-201ENSMUST00000199447 999 ntBASIC18.3■□□□□ 0.52
Strn4P58404 Gm10290-201ENSMUST00000200451 999 ntBASIC18.3■□□□□ 0.52
Strn4P58404 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Strn4P58404 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Strn4P58404 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Strn4P58404 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Strn4P58404 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Strn4P58404 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Strn4P58404 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Strn4P58404 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Strn4P58404 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Strn4P58404 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.29■□□□□ 0.52
Strn4P58404 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Strn4P58404 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Strn4P58404 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Strn4P58404 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Strn4P58404 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC18.29■□□□□ 0.52
Strn4P58404 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Strn4P58404 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Strn4P58404 Gm9908-201ENSMUST00000211534 448 ntBASIC18.29■□□□□ 0.52
Strn4P58404 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC18.29■□□□□ 0.52
Strn4P58404 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC18.29■□□□□ 0.52
Strn4P58404 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Strn4P58404 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Strn4P58404 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Strn4P58404 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Strn4P58404 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Strn4P58404 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Strn4P58404 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.29■□□□□ 0.52
Strn4P58404 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Strn4P58404 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.29■□□□□ 0.52
Strn4P58404 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Strn4P58404 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Strn4P58404 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Strn4P58404 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Strn4P58404 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Strn4P58404 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Strn4P58404 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Strn4P58404 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Strn4P58404 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Strn4P58404 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Strn4P58404 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Strn4P58404 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Strn4P58404 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Strn4P58404 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.28■□□□□ 0.52
Strn4P58404 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Strn4P58404 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Strn4P58404 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Strn4P58404 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Strn4P58404 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Strn4P58404 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC18.28■□□□□ 0.52
Strn4P58404 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Strn4P58404 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Strn4P58404 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC18.28■□□□□ 0.52
Strn4P58404 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Strn4P58404 Gm7390-201ENSMUST00000212452 1216 ntBASIC18.28■□□□□ 0.52
Strn4P58404 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC18.28■□□□□ 0.52
Strn4P58404 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Strn4P58404 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Strn4P58404 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Strn4P58404 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Strn4P58404 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.28■□□□□ 0.52
Strn4P58404 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Strn4P58404 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Strn4P58404 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Strn4P58404 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Strn4P58404 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Strn4P58404 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Strn4P58404 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Strn4P58404 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Strn4P58404 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Strn4P58404 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Strn4P58404 Gm6944-201ENSMUST00000182449 1006 ntBASIC18.27■□□□□ 0.52
Strn4P58404 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Strn4P58404 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Strn4P58404 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Strn4P58404 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Strn4P58404 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.27■□□□□ 0.52
Strn4P58404 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Strn4P58404 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Strn4P58404 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Strn4P58404 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Strn4P58404 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Strn4P58404 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Strn4P58404 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Strn4P58404 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.27■□□□□ 0.51
Strn4P58404 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Strn4P58404 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Strn4P58404 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Strn4P58404 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Strn4P58404 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.26■□□□□ 0.51
Strn4P58404 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.26■□□□□ 0.51
Strn4P58404 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms