Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.59■□□□□ 0.25
Mmp20P57748 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp20P57748 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp20P57748 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp20P57748 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Mmp20P57748 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp20P57748 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp20P57748 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp20P57748 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.59■□□□□ 0.25
Mmp20P57748 Gm15678-201ENSMUST00000117573 960 ntBASIC16.59■□□□□ 0.25
Mmp20P57748 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp20P57748 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.59■□□□□ 0.25
Mmp20P57748 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Mmp20P57748 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.59■□□□□ 0.25
Mmp20P57748 Gm28911-201ENSMUST00000188837 117 ntBASIC16.59■□□□□ 0.25
Mmp20P57748 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp20P57748 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Mmp20P57748 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp20P57748 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp20P57748 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp20P57748 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Mmp20P57748 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp20P57748 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.59■□□□□ 0.25
Mmp20P57748 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp20P57748 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Mmp20P57748 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Mmp20P57748 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp20P57748 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp20P57748 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Mmp20P57748 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp20P57748 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.58■□□□□ 0.24
Mmp20P57748 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp20P57748 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.58■□□□□ 0.24
Mmp20P57748 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.58■□□□□ 0.24
Mmp20P57748 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp20P57748 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp20P57748 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp20P57748 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp20P57748 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp20P57748 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp20P57748 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp20P57748 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Mmp20P57748 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp20P57748 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Mmp20P57748 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp20P57748 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp20P57748 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp20P57748 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp20P57748 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp20P57748 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp20P57748 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp20P57748 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Mmp20P57748 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp20P57748 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp20P57748 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Mmp20P57748 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp20P57748 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp20P57748 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp20P57748 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp20P57748 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp20P57748 Gm21470-201ENSMUST00000187680 696 ntBASIC16.57■□□□□ 0.24
Mmp20P57748 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp20P57748 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp20P57748 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp20P57748 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Mmp20P57748 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp20P57748 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp20P57748 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp20P57748 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Mmp20P57748 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp20P57748 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp20P57748 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.56■□□□□ 0.24
Mmp20P57748 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp20P57748 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Mmp20P57748 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp20P57748 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp20P57748 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp20P57748 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Mmp20P57748 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Mmp20P57748 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp20P57748 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp20P57748 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.56■□□□□ 0.24
Mmp20P57748 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp20P57748 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp20P57748 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
Mmp20P57748 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.56■□□□□ 0.24
Mmp20P57748 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.56■□□□□ 0.24
Mmp20P57748 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.56■□□□□ 0.24
Mmp20P57748 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp20P57748 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Mmp20P57748 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.56■□□□□ 0.24
Mmp20P57748 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.56■□□□□ 0.24
Mmp20P57748 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.56■□□□□ 0.24
Mmp20P57748 Gm5279-201ENSMUST00000199575 745 ntBASIC16.56■□□□□ 0.24
Mmp20P57748 Gm9899-201ENSMUST00000065519 555 ntBASIC16.56■□□□□ 0.24
Mmp20P57748 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp20P57748 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp20P57748 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp20P57748 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp20P57748 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms