Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.8□□□□□ -0.52
Sssca1P56873 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.8□□□□□ -0.52
Sssca1P56873 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sssca1P56873 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sssca1P56873 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sssca1P56873 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sssca1P56873 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sssca1P56873 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sssca1P56873 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sssca1P56873 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sssca1P56873 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sssca1P56873 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sssca1P56873 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sssca1P56873 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Sssca1P56873 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Sssca1P56873 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.79□□□□□ -0.52
Sssca1P56873 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.79□□□□□ -0.52
Sssca1P56873 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC11.79□□□□□ -0.52
Sssca1P56873 Gm37153-201ENSMUST00000193637 231 ntBASIC11.79□□□□□ -0.52
Sssca1P56873 Gm9682-201ENSMUST00000197505 556 ntBASIC11.79□□□□□ -0.52
Sssca1P56873 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.79□□□□□ -0.52
Sssca1P56873 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Sssca1P56873 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.79□□□□□ -0.52
Sssca1P56873 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Sssca1P56873 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sssca1P56873 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sssca1P56873 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.78□□□□□ -0.52
Sssca1P56873 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.78□□□□□ -0.52
Sssca1P56873 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Sssca1P56873 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.78□□□□□ -0.52
Sssca1P56873 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sssca1P56873 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.78□□□□□ -0.52
Sssca1P56873 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Sssca1P56873 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.78□□□□□ -0.52
Sssca1P56873 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Sssca1P56873 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sssca1P56873 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.78□□□□□ -0.52
Sssca1P56873 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.78□□□□□ -0.52
Sssca1P56873 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.78□□□□□ -0.52
Sssca1P56873 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.78□□□□□ -0.52
Sssca1P56873 Gm17807-201ENSMUST00000186869 298 ntBASIC11.78□□□□□ -0.52
Sssca1P56873 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.78□□□□□ -0.52
Sssca1P56873 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Sssca1P56873 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sssca1P56873 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sssca1P56873 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Sssca1P56873 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms