Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lim2P56563 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lim2P56563 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lim2P56563 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lim2P56563 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Lim2P56563 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lim2P56563 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lim2P56563 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lim2P56563 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lim2P56563 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Lim2P56563 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lim2P56563 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lim2P56563 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lim2P56563 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.58□□□□□ -0.08
Lim2P56563 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lim2P56563 Gm13464-201ENSMUST00000119418 935 ntBASIC14.58□□□□□ -0.08
Lim2P56563 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Lim2P56563 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Lim2P56563 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Lim2P56563 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lim2P56563 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Lim2P56563 Gm27920-201ENSMUST00000183953 96 ntBASIC14.58□□□□□ -0.08
Lim2P56563 Gm43125-201ENSMUST00000201724 730 ntBASIC14.58□□□□□ -0.08
Lim2P56563 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.58□□□□□ -0.08
Lim2P56563 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Lim2P56563 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Lim2P56563 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.58□□□□□ -0.08
Lim2P56563 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lim2P56563 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lim2P56563 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.58□□□□□ -0.08
Lim2P56563 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lim2P56563 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Lim2P56563 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lim2P56563 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lim2P56563 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Lim2P56563 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lim2P56563 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lim2P56563 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lim2P56563 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.57□□□□□ -0.08
Lim2P56563 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lim2P56563 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lim2P56563 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lim2P56563 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lim2P56563 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lim2P56563 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lim2P56563 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lim2P56563 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lim2P56563 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lim2P56563 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lim2P56563 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lim2P56563 Gm14701-201ENSMUST00000117156 348 ntBASIC14.57□□□□□ -0.08
Lim2P56563 Gm18737-201ENSMUST00000173594 937 ntBASIC14.57□□□□□ -0.08
Lim2P56563 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.57□□□□□ -0.08
Lim2P56563 Gm43474-201ENSMUST00000196415 774 ntBASIC14.57□□□□□ -0.08
Lim2P56563 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.57□□□□□ -0.08
Lim2P56563 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.57□□□□□ -0.08
Lim2P56563 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lim2P56563 Gm8396-201ENSMUST00000057361 823 ntBASIC14.57□□□□□ -0.08
Lim2P56563 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lim2P56563 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.57□□□□□ -0.08
Lim2P56563 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lim2P56563 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lim2P56563 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lim2P56563 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lim2P56563 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lim2P56563 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Lim2P56563 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Lim2P56563 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Lim2P56563 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lim2P56563 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.57□□□□□ -0.08
Lim2P56563 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lim2P56563 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lim2P56563 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Lim2P56563 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lim2P56563 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.56□□□□□ -0.08
Lim2P56563 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lim2P56563 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lim2P56563 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lim2P56563 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lim2P56563 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lim2P56563 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.56□□□□□ -0.08
Lim2P56563 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Lim2P56563 Gm2810-201ENSMUST00000118681 990 ntBASIC14.56□□□□□ -0.08
Lim2P56563 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.56□□□□□ -0.08
Lim2P56563 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lim2P56563 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lim2P56563 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lim2P56563 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lim2P56563 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
Lim2P56563 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lim2P56563 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lim2P56563 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lim2P56563 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lim2P56563 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.56□□□□□ -0.08
Lim2P56563 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lim2P56563 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lim2P56563 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Lim2P56563 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lim2P56563 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Lim2P56563 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms