Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Atxn1P54254 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Atxn1P54254 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Atxn1P54254 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Atxn1P54254 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Atxn1P54254 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Atxn1P54254 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.48□□□□□ -0.09
Atxn1P54254 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Atxn1P54254 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.48□□□□□ -0.09
Atxn1P54254 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Atxn1P54254 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Atxn1P54254 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Atxn1P54254 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Atxn1P54254 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Atxn1P54254 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Atxn1P54254 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Atxn1P54254 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Atxn1P54254 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Atxn1P54254 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.47□□□□□ -0.09
Atxn1P54254 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.47□□□□□ -0.09
Atxn1P54254 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Atxn1P54254 Gm17150-201ENSMUST00000165577 381 ntBASIC14.47□□□□□ -0.09
Atxn1P54254 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Atxn1P54254 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Atxn1P54254 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Atxn1P54254 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Atxn1P54254 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Atxn1P54254 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.47□□□□□ -0.09
Atxn1P54254 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Atxn1P54254 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Atxn1P54254 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Atxn1P54254 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Atxn1P54254 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atxn1P54254 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.46□□□□□ -0.09
Atxn1P54254 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atxn1P54254 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atxn1P54254 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Atxn1P54254 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atxn1P54254 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.46□□□□□ -0.09
Atxn1P54254 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Atxn1P54254 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Atxn1P54254 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atxn1P54254 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atxn1P54254 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.46□□□□□ -0.09
Atxn1P54254 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atxn1P54254 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.46□□□□□ -0.09
Atxn1P54254 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.46□□□□□ -0.09
Atxn1P54254 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Atxn1P54254 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Atxn1P54254 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atxn1P54254 Gm42612-201ENSMUST00000197986 623 ntBASIC14.46□□□□□ -0.09
Atxn1P54254 Gm43170-201ENSMUST00000199827 612 ntBASIC14.46□□□□□ -0.09
Atxn1P54254 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.46□□□□□ -0.09
Atxn1P54254 Gm45668-201ENSMUST00000211271 493 ntBASIC14.46□□□□□ -0.09
Atxn1P54254 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atxn1P54254 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atxn1P54254 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.46□□□□□ -0.09
Atxn1P54254 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atxn1P54254 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Atxn1P54254 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Atxn1P54254 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.46□□□□□ -0.09
Atxn1P54254 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Atxn1P54254 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Atxn1P54254 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Atxn1P54254 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Atxn1P54254 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Atxn1P54254 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.45□□□□□ -0.1
Atxn1P54254 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.45□□□□□ -0.1
Atxn1P54254 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.45□□□□□ -0.1
Atxn1P54254 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 Gm15823-201ENSMUST00000064305 670 ntBASIC14.45□□□□□ -0.1
Atxn1P54254 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.45□□□□□ -0.1
Atxn1P54254 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Atxn1P54254 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Atxn1P54254 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Atxn1P54254 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms