Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lbx1P52955 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lbx1P52955 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lbx1P52955 Gm12928-201ENSMUST00000117115 573 ntBASIC14.04□□□□□ -0.16
Lbx1P52955 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.04□□□□□ -0.16
Lbx1P52955 Gm5479-201ENSMUST00000160578 435 ntBASIC14.04□□□□□ -0.16
Lbx1P52955 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.04□□□□□ -0.16
Lbx1P52955 Gm18935-201ENSMUST00000212692 664 ntBASIC14.04□□□□□ -0.16
Lbx1P52955 Gm9368-201ENSMUST00000219348 831 ntBASIC14.04□□□□□ -0.16
Lbx1P52955 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lbx1P52955 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.04□□□□□ -0.16
Lbx1P52955 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lbx1P52955 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lbx1P52955 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Lbx1P52955 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lbx1P52955 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lbx1P52955 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lbx1P52955 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lbx1P52955 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lbx1P52955 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.04□□□□□ -0.16
Lbx1P52955 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lbx1P52955 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lbx1P52955 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lbx1P52955 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lbx1P52955 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lbx1P52955 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lbx1P52955 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Lbx1P52955 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lbx1P52955 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Lbx1P52955 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.03□□□□□ -0.16
Lbx1P52955 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.03□□□□□ -0.16
Lbx1P52955 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Lbx1P52955 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC14.03□□□□□ -0.16
Lbx1P52955 Gm13216-201ENSMUST00000117145 591 ntBASIC14.03□□□□□ -0.16
Lbx1P52955 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Gm5523-201ENSMUST00000180415 997 ntBASIC14.03□□□□□ -0.16
Lbx1P52955 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Lbx1P52955 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.03□□□□□ -0.16
Lbx1P52955 Gm44608-201ENSMUST00000206827 855 ntBASIC14.03□□□□□ -0.16
Lbx1P52955 Gm6334-201ENSMUST00000207083 228 ntBASIC14.03□□□□□ -0.16
Lbx1P52955 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Lbx1P52955 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.03□□□□□ -0.16
Lbx1P52955 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.03□□□□□ -0.16
Lbx1P52955 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Lbx1P52955 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Lbx1P52955 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Lbx1P52955 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.03□□□□□ -0.16
Lbx1P52955 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lbx1P52955 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lbx1P52955 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Lbx1P52955 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Lbx1P52955 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lbx1P52955 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lbx1P52955 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lbx1P52955 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lbx1P52955 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.02□□□□□ -0.16
Lbx1P52955 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Lbx1P52955 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Lbx1P52955 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.02□□□□□ -0.16
Lbx1P52955 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lbx1P52955 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lbx1P52955 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.02□□□□□ -0.17
Lbx1P52955 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lbx1P52955 Gm24644-201ENSMUST00000157114 139 ntBASIC14.02□□□□□ -0.17
Lbx1P52955 Gm37259-201ENSMUST00000193903 849 ntBASIC14.02□□□□□ -0.17
Lbx1P52955 Gm45865-201ENSMUST00000211815 945 ntBASIC14.02□□□□□ -0.17
Lbx1P52955 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lbx1P52955 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Lbx1P52955 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lbx1P52955 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lbx1P52955 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Lbx1P52955 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Lbx1P52955 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms