Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.62□□□□□ -0.39
TgfaP48030 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TgfaP48030 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TgfaP48030 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.62□□□□□ -0.39
TgfaP48030 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TgfaP48030 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TgfaP48030 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TgfaP48030 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.61□□□□□ -0.39
TgfaP48030 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.61□□□□□ -0.39
TgfaP48030 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.61□□□□□ -0.39
TgfaP48030 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.61□□□□□ -0.39
TgfaP48030 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.61□□□□□ -0.39
TgfaP48030 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
TgfaP48030 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.61□□□□□ -0.39
TgfaP48030 Gm33320-201ENSMUST00000192232 530 ntBASIC12.61□□□□□ -0.39
TgfaP48030 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TgfaP48030 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.61□□□□□ -0.39
TgfaP48030 Gm6916-202ENSMUST00000205523 195 ntBASIC12.61□□□□□ -0.39
TgfaP48030 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TgfaP48030 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TgfaP48030 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TgfaP48030 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TgfaP48030 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TgfaP48030 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TgfaP48030 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.6□□□□□ -0.39
TgfaP48030 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TgfaP48030 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TgfaP48030 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TgfaP48030 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TgfaP48030 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TgfaP48030 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TgfaP48030 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TgfaP48030 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.6□□□□□ -0.39
TgfaP48030 AY702102-202ENSMUST00000194651 1173 ntBASIC12.6□□□□□ -0.39
TgfaP48030 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TgfaP48030 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TgfaP48030 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TgfaP48030 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.6□□□□□ -0.39
TgfaP48030 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
TgfaP48030 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TgfaP48030 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TgfaP48030 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TgfaP48030 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.6□□□□□ -0.39
TgfaP48030 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TgfaP48030 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TgfaP48030 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TgfaP48030 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.6□□□□□ -0.39
TgfaP48030 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TgfaP48030 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TgfaP48030 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TgfaP48030 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TgfaP48030 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TgfaP48030 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TgfaP48030 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TgfaP48030 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TgfaP48030 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TgfaP48030 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TgfaP48030 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TgfaP48030 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TgfaP48030 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TgfaP48030 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TgfaP48030 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TgfaP48030 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TgfaP48030 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TgfaP48030 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.59□□□□□ -0.39
TgfaP48030 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TgfaP48030 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TgfaP48030 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.59□□□□□ -0.39
TgfaP48030 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TgfaP48030 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TgfaP48030 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TgfaP48030 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms