Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col18a1P39061 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col18a1P39061 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Col18a1P39061 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col18a1P39061 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Col18a1P39061 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC18.96■□□□□ 0.63
Col18a1P39061 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col18a1P39061 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col18a1P39061 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC18.96■□□□□ 0.63
Col18a1P39061 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col18a1P39061 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col18a1P39061 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Col18a1P39061 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC18.96■□□□□ 0.63
Col18a1P39061 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col18a1P39061 Gm13730-201ENSMUST00000121036 1462 ntBASIC18.96■□□□□ 0.63
Col18a1P39061 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC18.96■□□□□ 0.63
Col18a1P39061 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC18.96■□□□□ 0.63
Col18a1P39061 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col18a1P39061 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col18a1P39061 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col18a1P39061 AC132384.14-201ENSMUST00000219346 1147 ntBASIC18.96■□□□□ 0.63
Col18a1P39061 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Col18a1P39061 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col18a1P39061 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col18a1P39061 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col18a1P39061 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
Col18a1P39061 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col18a1P39061 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col18a1P39061 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Col18a1P39061 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col18a1P39061 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col18a1P39061 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col18a1P39061 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col18a1P39061 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col18a1P39061 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col18a1P39061 Gm3756-201ENSMUST00000169182 1355 ntBASIC18.95■□□□□ 0.62
Col18a1P39061 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Col18a1P39061 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC18.95■□□□□ 0.62
Col18a1P39061 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col18a1P39061 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC18.95■□□□□ 0.62
Col18a1P39061 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col18a1P39061 Gm5161-201ENSMUST00000075243 853 ntBASIC18.95■□□□□ 0.62
Col18a1P39061 n-R5s195-201ENSMUST00000082891 119 ntBASIC18.95■□□□□ 0.62
Col18a1P39061 Gm10268-201ENSMUST00000085340 555 ntBASIC18.95■□□□□ 0.62
Col18a1P39061 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col18a1P39061 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col18a1P39061 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Col18a1P39061 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col18a1P39061 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.95■□□□□ 0.62
Col18a1P39061 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Col18a1P39061 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Col18a1P39061 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col18a1P39061 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col18a1P39061 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col18a1P39061 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col18a1P39061 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC18.94■□□□□ 0.62
Col18a1P39061 Gm43138-201ENSMUST00000199123 708 ntBASIC18.94■□□□□ 0.62
Col18a1P39061 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col18a1P39061 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col18a1P39061 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Col18a1P39061 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col18a1P39061 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col18a1P39061 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Col18a1P39061 Gm43289-201ENSMUST00000200537 1475 ntBASIC18.94■□□□□ 0.62
Col18a1P39061 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Col18a1P39061 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col18a1P39061 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col18a1P39061 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col18a1P39061 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col18a1P39061 Gm14381-201ENSMUST00000122105 414 ntBASIC18.93■□□□□ 0.62
Col18a1P39061 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col18a1P39061 Gm21769-201ENSMUST00000211922 111 ntBASIC18.93■□□□□ 0.62
Col18a1P39061 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC18.93■□□□□ 0.62
Col18a1P39061 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col18a1P39061 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col18a1P39061 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col18a1P39061 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col18a1P39061 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col18a1P39061 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col18a1P39061 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC18.93■□□□□ 0.62
Col18a1P39061 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col18a1P39061 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col18a1P39061 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Col18a1P39061 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col18a1P39061 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col18a1P39061 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col18a1P39061 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col18a1P39061 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col18a1P39061 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Col18a1P39061 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Col18a1P39061 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC18.93■□□□□ 0.62
Col18a1P39061 Gm37922-201ENSMUST00000195596 455 ntBASIC18.93■□□□□ 0.62
Col18a1P39061 Gm2824-203ENSMUST00000226189 1228 ntBASIC18.93■□□□□ 0.62
Col18a1P39061 Itm2b-204ENSMUST00000228637 783 ntBASIC18.93■□□□□ 0.62
Col18a1P39061 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col18a1P39061 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Col18a1P39061 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col18a1P39061 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col18a1P39061 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col18a1P39061 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms