Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
LdlrP35951 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LdlrP35951 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LdlrP35951 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LdlrP35951 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.09
LdlrP35951 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.52□□□□□ -0.09
LdlrP35951 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LdlrP35951 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
LdlrP35951 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LdlrP35951 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LdlrP35951 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LdlrP35951 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LdlrP35951 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LdlrP35951 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LdlrP35951 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LdlrP35951 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LdlrP35951 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
LdlrP35951 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.51□□□□□ -0.09
LdlrP35951 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
LdlrP35951 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
LdlrP35951 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.51□□□□□ -0.09
LdlrP35951 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.51□□□□□ -0.09
LdlrP35951 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
LdlrP35951 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
LdlrP35951 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.51□□□□□ -0.09
LdlrP35951 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.51□□□□□ -0.09
LdlrP35951 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LdlrP35951 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
LdlrP35951 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.51□□□□□ -0.09
LdlrP35951 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LdlrP35951 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LdlrP35951 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LdlrP35951 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LdlrP35951 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
LdlrP35951 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LdlrP35951 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LdlrP35951 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LdlrP35951 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LdlrP35951 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LdlrP35951 Gm11764-201ENSMUST00000120221 623 ntBASIC14.5□□□□□ -0.09
LdlrP35951 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LdlrP35951 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.5□□□□□ -0.09
LdlrP35951 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.5□□□□□ -0.09
LdlrP35951 Chchd1-203ENSMUST00000224633 557 ntBASIC14.5□□□□□ -0.09
LdlrP35951 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LdlrP35951 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LdlrP35951 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LdlrP35951 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.5□□□□□ -0.09
LdlrP35951 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LdlrP35951 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
LdlrP35951 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LdlrP35951 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LdlrP35951 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LdlrP35951 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LdlrP35951 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LdlrP35951 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LdlrP35951 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LdlrP35951 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
LdlrP35951 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LdlrP35951 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LdlrP35951 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.49□□□□□ -0.09
LdlrP35951 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LdlrP35951 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.49□□□□□ -0.09
LdlrP35951 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.49□□□□□ -0.09
LdlrP35951 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LdlrP35951 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.49□□□□□ -0.09
LdlrP35951 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms