Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.93■□□□□ 0.14
Sox5P35710 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox5P35710 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.93■□□□□ 0.14
Sox5P35710 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox5P35710 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sox5P35710 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox5P35710 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox5P35710 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox5P35710 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sox5P35710 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.93■□□□□ 0.14
Sox5P35710 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.93■□□□□ 0.14
Sox5P35710 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.93■□□□□ 0.14
Sox5P35710 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Sox5P35710 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Sox5P35710 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Sox5P35710 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sox5P35710 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox5P35710 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox5P35710 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.92■□□□□ 0.14
Sox5P35710 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.92■□□□□ 0.14
Sox5P35710 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox5P35710 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Sox5P35710 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Sox5P35710 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Sox5P35710 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Sox5P35710 Gm9103-201ENSMUST00000119371 405 ntBASIC15.92■□□□□ 0.14
Sox5P35710 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox5P35710 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sox5P35710 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox5P35710 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox5P35710 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox5P35710 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Sox5P35710 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sox5P35710 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Sox5P35710 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox5P35710 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Sox5P35710 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Sox5P35710 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox5P35710 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sox5P35710 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Sox5P35710 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.91■□□□□ 0.14
Sox5P35710 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.91■□□□□ 0.14
Sox5P35710 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Sox5P35710 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Sox5P35710 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Sox5P35710 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Sox5P35710 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox5P35710 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox5P35710 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox5P35710 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.9■□□□□ 0.14
Sox5P35710 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox5P35710 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox5P35710 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox5P35710 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox5P35710 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox5P35710 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Sox5P35710 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox5P35710 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox5P35710 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox5P35710 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.9■□□□□ 0.14
Sox5P35710 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox5P35710 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Sox5P35710 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox5P35710 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox5P35710 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.9■□□□□ 0.14
Sox5P35710 Gm7977-201ENSMUST00000193787 748 ntBASIC15.9■□□□□ 0.14
Sox5P35710 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.9■□□□□ 0.14
Sox5P35710 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox5P35710 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox5P35710 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.9■□□□□ 0.14
Sox5P35710 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox5P35710 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox5P35710 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Sox5P35710 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms