Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.56□□□□□ -0.4
Slc6a1P31648 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.56□□□□□ -0.4
Slc6a1P31648 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.56□□□□□ -0.4
Slc6a1P31648 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Slc6a1P31648 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.56□□□□□ -0.4
Slc6a1P31648 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Slc6a1P31648 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
Slc6a1P31648 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc6a1P31648 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a1P31648 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a1P31648 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a1P31648 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a1P31648 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a1P31648 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a1P31648 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a1P31648 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a1P31648 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a1P31648 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.55□□□□□ -0.4
Slc6a1P31648 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a1P31648 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a1P31648 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a1P31648 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.55□□□□□ -0.4
Slc6a1P31648 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.55□□□□□ -0.4
Slc6a1P31648 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.55□□□□□ -0.4
Slc6a1P31648 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Slc6a1P31648 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.55□□□□□ -0.4
Slc6a1P31648 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a1P31648 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a1P31648 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a1P31648 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a1P31648 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a1P31648 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.55□□□□□ -0.4
Slc6a1P31648 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a1P31648 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a1P31648 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.55□□□□□ -0.4
Slc6a1P31648 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a1P31648 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Slc6a1P31648 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Slc6a1P31648 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.54□□□□□ -0.4
Slc6a1P31648 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Slc6a1P31648 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.54□□□□□ -0.4
Slc6a1P31648 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.54□□□□□ -0.4
Slc6a1P31648 Mir8098-201ENSMUST00000184011 137 ntBASIC12.54□□□□□ -0.4
Slc6a1P31648 Gm27459-201ENSMUST00000184860 107 ntBASIC12.54□□□□□ -0.4
Slc6a1P31648 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.54□□□□□ -0.4
Slc6a1P31648 Gm44454-201ENSMUST00000198541 138 ntBASIC12.54□□□□□ -0.4
Slc6a1P31648 Gm43347-201ENSMUST00000200226 580 ntBASIC12.54□□□□□ -0.4
Slc6a1P31648 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Slc6a1P31648 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Slc6a1P31648 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Slc6a1P31648 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a1P31648 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.53□□□□□ -0.4
Slc6a1P31648 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Slc6a1P31648 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Slc6a1P31648 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Slc6a1P31648 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms