Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.35■□□□□ 0.21
Col2a1P28481 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.35■□□□□ 0.21
Col2a1P28481 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col2a1P28481 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.35■□□□□ 0.21
Col2a1P28481 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col2a1P28481 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Col2a1P28481 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col2a1P28481 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col2a1P28481 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Col2a1P28481 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col2a1P28481 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col2a1P28481 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col2a1P28481 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col2a1P28481 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col2a1P28481 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Col2a1P28481 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col2a1P28481 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col2a1P28481 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Col2a1P28481 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.34■□□□□ 0.21
Col2a1P28481 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col2a1P28481 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col2a1P28481 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col2a1P28481 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Col2a1P28481 Mir6392-201ENSMUST00000184924 108 ntBASIC16.34■□□□□ 0.21
Col2a1P28481 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.34■□□□□ 0.21
Col2a1P28481 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.34■□□□□ 0.21
Col2a1P28481 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.34■□□□□ 0.21
Col2a1P28481 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Col2a1P28481 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.34■□□□□ 0.21
Col2a1P28481 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col2a1P28481 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col2a1P28481 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col2a1P28481 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col2a1P28481 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.33■□□□□ 0.21
Col2a1P28481 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col2a1P28481 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col2a1P28481 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col2a1P28481 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Col2a1P28481 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col2a1P28481 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col2a1P28481 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.33■□□□□ 0.2
Col2a1P28481 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.33■□□□□ 0.2
Col2a1P28481 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col2a1P28481 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col2a1P28481 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Col2a1P28481 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col2a1P28481 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col2a1P28481 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col2a1P28481 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.33■□□□□ 0.2
Col2a1P28481 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col2a1P28481 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col2a1P28481 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col2a1P28481 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col2a1P28481 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col2a1P28481 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col2a1P28481 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
Col2a1P28481 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Col2a1P28481 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col2a1P28481 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col2a1P28481 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col2a1P28481 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col2a1P28481 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col2a1P28481 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col2a1P28481 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col2a1P28481 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.32■□□□□ 0.2
Col2a1P28481 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.32■□□□□ 0.2
Col2a1P28481 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.32■□□□□ 0.2
Col2a1P28481 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.32■□□□□ 0.2
Col2a1P28481 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col2a1P28481 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.32■□□□□ 0.2
Col2a1P28481 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col2a1P28481 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col2a1P28481 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col2a1P28481 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col2a1P28481 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col2a1P28481 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col2a1P28481 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.32■□□□□ 0.2
Col2a1P28481 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col2a1P28481 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col2a1P28481 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col2a1P28481 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.32■□□□□ 0.2
Col2a1P28481 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col2a1P28481 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.31■□□□□ 0.2
Col2a1P28481 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col2a1P28481 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.31■□□□□ 0.2
Col2a1P28481 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Col2a1P28481 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Col2a1P28481 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col2a1P28481 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col2a1P28481 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col2a1P28481 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col2a1P28481 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.31■□□□□ 0.2
Col2a1P28481 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Col2a1P28481 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.31■□□□□ 0.2
Col2a1P28481 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.31■□□□□ 0.2
Col2a1P28481 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Col2a1P28481 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.31■□□□□ 0.2
Col2a1P28481 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
Col2a1P28481 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col2a1P28481 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms