Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Cd40P27512 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Cd40P27512 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 Gm25287-201ENSMUST00000103846 110 ntBASIC13.18□□□□□ -0.3
Cd40P27512 Gm22918-201ENSMUST00000103855 110 ntBASIC13.18□□□□□ -0.3
Cd40P27512 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.18□□□□□ -0.3
Cd40P27512 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.18□□□□□ -0.3
Cd40P27512 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.18□□□□□ -0.3
Cd40P27512 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.18□□□□□ -0.3
Cd40P27512 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cd40P27512 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cd40P27512 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.18□□□□□ -0.3
Cd40P27512 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.18□□□□□ -0.3
Cd40P27512 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cd40P27512 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cd40P27512 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cd40P27512 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40P27512 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40P27512 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cd40P27512 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40P27512 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40P27512 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40P27512 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40P27512 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40P27512 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40P27512 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40P27512 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40P27512 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40P27512 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.17□□□□□ -0.3
Cd40P27512 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40P27512 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40P27512 Gm43125-201ENSMUST00000201724 730 ntBASIC13.17□□□□□ -0.3
Cd40P27512 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40P27512 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.17□□□□□ -0.3
Cd40P27512 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cd40P27512 Chchd1-203ENSMUST00000224633 557 ntBASIC13.17□□□□□ -0.3
Cd40P27512 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Cd40P27512 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40P27512 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cd40P27512 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Cd40P27512 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40P27512 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40P27512 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40P27512 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40P27512 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40P27512 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40P27512 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cd40P27512 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40P27512 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40P27512 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cd40P27512 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40P27512 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40P27512 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40P27512 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40P27512 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40P27512 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40P27512 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40P27512 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40P27512 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40P27512 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40P27512 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40P27512 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cd40P27512 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40P27512 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.16□□□□□ -0.3
Cd40P27512 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.16□□□□□ -0.3
Cd40P27512 Gm44335-201ENSMUST00000196879 141 ntBASIC13.16□□□□□ -0.3
Cd40P27512 Gm44297-201ENSMUST00000198304 141 ntBASIC13.16□□□□□ -0.3
Cd40P27512 Gm44346-201ENSMUST00000198851 141 ntBASIC13.16□□□□□ -0.3
Cd40P27512 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.16□□□□□ -0.3
Cd40P27512 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.16□□□□□ -0.3
Cd40P27512 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40P27512 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40P27512 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40P27512 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40P27512 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms