Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp53P15975 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp53P15975 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp53P15975 Mir1897-201ENSMUST00000122581 272 ntBASIC16.85■□□□□ 0.29
Usp53P15975 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp53P15975 Gm27631-201ENSMUST00000184163 466 ntBASIC16.85■□□□□ 0.29
Usp53P15975 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.85■□□□□ 0.29
Usp53P15975 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Usp53P15975 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Usp53P15975 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp53P15975 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp53P15975 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp53P15975 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp53P15975 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp53P15975 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Usp53P15975 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp53P15975 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp53P15975 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp53P15975 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Usp53P15975 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.85■□□□□ 0.29
Usp53P15975 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp53P15975 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp53P15975 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp53P15975 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Usp53P15975 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp53P15975 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usp53P15975 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Usp53P15975 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usp53P15975 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.84■□□□□ 0.29
Usp53P15975 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.84■□□□□ 0.29
Usp53P15975 Gm6222-201ENSMUST00000120787 396 ntBASIC16.84■□□□□ 0.29
Usp53P15975 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.84■□□□□ 0.29
Usp53P15975 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Usp53P15975 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Usp53P15975 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.84■□□□□ 0.29
Usp53P15975 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.84■□□□□ 0.29
Usp53P15975 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usp53P15975 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp53P15975 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp53P15975 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Usp53P15975 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp53P15975 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp53P15975 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp53P15975 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.84■□□□□ 0.29
Usp53P15975 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usp53P15975 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp53P15975 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp53P15975 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp53P15975 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp53P15975 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp53P15975 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp53P15975 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp53P15975 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp53P15975 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp53P15975 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp53P15975 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.83■□□□□ 0.28
Usp53P15975 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.83■□□□□ 0.28
Usp53P15975 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp53P15975 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp53P15975 Gm27321-201ENSMUST00000185021 205 ntBASIC16.83■□□□□ 0.28
Usp53P15975 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp53P15975 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp53P15975 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp53P15975 Gm9063-201ENSMUST00000223299 582 ntBASIC16.83■□□□□ 0.28
Usp53P15975 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Usp53P15975 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp53P15975 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Usp53P15975 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp53P15975 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp53P15975 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp53P15975 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp53P15975 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp53P15975 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp53P15975 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp53P15975 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp53P15975 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp53P15975 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp53P15975 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Usp53P15975 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp53P15975 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp53P15975 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp53P15975 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp53P15975 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp53P15975 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp53P15975 Gm12428-201ENSMUST00000119844 727 ntBASIC16.82■□□□□ 0.28
Usp53P15975 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp53P15975 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp53P15975 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.82■□□□□ 0.28
Usp53P15975 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.82■□□□□ 0.28
Usp53P15975 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp53P15975 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Usp53P15975 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp53P15975 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp53P15975 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Usp53P15975 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp53P15975 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp53P15975 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp53P15975 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Usp53P15975 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp53P15975 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms