Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ctla2aP12399 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ctla2aP12399 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ctla2aP12399 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ctla2aP12399 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.13□□□□□ -0.31
Ctla2aP12399 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.13□□□□□ -0.31
Ctla2aP12399 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.13□□□□□ -0.31
Ctla2aP12399 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.13□□□□□ -0.31
Ctla2aP12399 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ctla2aP12399 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.13□□□□□ -0.31
Ctla2aP12399 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.13□□□□□ -0.31
Ctla2aP12399 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ctla2aP12399 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ctla2aP12399 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ctla2aP12399 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ctla2aP12399 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ctla2aP12399 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ctla2aP12399 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.13□□□□□ -0.31
Ctla2aP12399 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ctla2aP12399 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ctla2aP12399 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ctla2aP12399 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ctla2aP12399 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ctla2aP12399 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ctla2aP12399 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ctla2aP12399 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ctla2aP12399 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ctla2aP12399 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ctla2aP12399 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ctla2aP12399 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ctla2aP12399 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ctla2aP12399 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ctla2aP12399 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ctla2aP12399 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ctla2aP12399 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ctla2aP12399 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ctla2aP12399 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ctla2aP12399 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.12□□□□□ -0.31
Ctla2aP12399 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ctla2aP12399 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.12□□□□□ -0.31
Ctla2aP12399 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ctla2aP12399 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ctla2aP12399 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ctla2aP12399 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ctla2aP12399 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ctla2aP12399 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ctla2aP12399 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.12□□□□□ -0.31
Ctla2aP12399 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ctla2aP12399 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.12□□□□□ -0.31
Ctla2aP12399 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ctla2aP12399 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ctla2aP12399 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ctla2aP12399 Gm9172-201ENSMUST00000212092 954 ntBASIC13.12□□□□□ -0.31
Ctla2aP12399 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.12□□□□□ -0.31
Ctla2aP12399 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ctla2aP12399 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.12□□□□□ -0.31
Ctla2aP12399 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ctla2aP12399 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ctla2aP12399 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ctla2aP12399 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ctla2aP12399 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ctla2aP12399 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ctla2aP12399 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Ctla2aP12399 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ctla2aP12399 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ctla2aP12399 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ctla2aP12399 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ctla2aP12399 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ctla2aP12399 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ctla2aP12399 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ctla2aP12399 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ctla2aP12399 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ctla2aP12399 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ctla2aP12399 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ctla2aP12399 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ctla2aP12399 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ctla2aP12399 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ctla2aP12399 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ctla2aP12399 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ctla2aP12399 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.11□□□□□ -0.31
Ctla2aP12399 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ctla2aP12399 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ctla2aP12399 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ctla2aP12399 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ctla2aP12399 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.11□□□□□ -0.31
Ctla2aP12399 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ctla2aP12399 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ctla2aP12399 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Ctla2aP12399 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ctla2aP12399 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.11□□□□□ -0.31
Ctla2aP12399 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ctla2aP12399 Grk6-205ENSMUST00000224653 2976 ntBASIC13.11□□□□□ -0.31
Ctla2aP12399 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ctla2aP12399 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ctla2aP12399 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ctla2aP12399 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ctla2aP12399 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ctla2aP12399 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ctla2aP12399 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ctla2aP12399 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms