Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a1P11087 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a1P11087 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a1P11087 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a1P11087 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a1P11087 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a1P11087 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.86■□□□□ 0.29
Col1a1P11087 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.86■□□□□ 0.29
Col1a1P11087 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a1P11087 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a1P11087 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a1P11087 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a1P11087 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a1P11087 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a1P11087 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Col1a1P11087 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Col1a1P11087 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a1P11087 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a1P11087 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Col1a1P11087 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a1P11087 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a1P11087 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.86■□□□□ 0.29
Col1a1P11087 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a1P11087 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.86■□□□□ 0.29
Col1a1P11087 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Col1a1P11087 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a1P11087 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.86■□□□□ 0.29
Col1a1P11087 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a1P11087 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a1P11087 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.85■□□□□ 0.29
Col1a1P11087 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a1P11087 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a1P11087 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.85■□□□□ 0.29
Col1a1P11087 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a1P11087 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a1P11087 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a1P11087 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
Col1a1P11087 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a1P11087 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a1P11087 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a1P11087 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a1P11087 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.85■□□□□ 0.29
Col1a1P11087 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a1P11087 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a1P11087 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a1P11087 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a1P11087 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Col1a1P11087 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a1P11087 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC16.85■□□□□ 0.29
Col1a1P11087 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC16.85■□□□□ 0.29
Col1a1P11087 Gm15198-201ENSMUST00000117283 177 ntBASIC16.85■□□□□ 0.29
Col1a1P11087 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC16.85■□□□□ 0.29
Col1a1P11087 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a1P11087 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC16.85■□□□□ 0.29
Col1a1P11087 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a1P11087 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.85■□□□□ 0.29
Col1a1P11087 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC16.85■□□□□ 0.29
Col1a1P11087 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a1P11087 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a1P11087 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC16.85■□□□□ 0.29
Col1a1P11087 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a1P11087 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a1P11087 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.85■□□□□ 0.29
Col1a1P11087 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a1P11087 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Col1a1P11087 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a1P11087 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a1P11087 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Col1a1P11087 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a1P11087 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a1P11087 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC16.84■□□□□ 0.29
Col1a1P11087 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.84■□□□□ 0.29
Col1a1P11087 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.84■□□□□ 0.29
Col1a1P11087 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC16.84■□□□□ 0.29
Col1a1P11087 Gm7561-201ENSMUST00000211203 886 ntBASIC16.84■□□□□ 0.29
Col1a1P11087 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a1P11087 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.84■□□□□ 0.29
Col1a1P11087 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a1P11087 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a1P11087 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a1P11087 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a1P11087 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a1P11087 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a1P11087 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col1a1P11087 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Col1a1P11087 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col1a1P11087 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Col1a1P11087 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.83■□□□□ 0.29
Col1a1P11087 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.83■□□□□ 0.29
Col1a1P11087 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.83■□□□□ 0.29
Col1a1P11087 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col1a1P11087 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col1a1P11087 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col1a1P11087 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.83■□□□□ 0.28
Col1a1P11087 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Col1a1P11087 Gm24196-201ENSMUST00000179161 110 ntBASIC16.83■□□□□ 0.28
Col1a1P11087 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Col1a1P11087 Gm29127-201ENSMUST00000188304 517 ntBASIC16.83■□□□□ 0.28
Col1a1P11087 Gm37714-201ENSMUST00000194742 342 ntBASIC16.83■□□□□ 0.28
Col1a1P11087 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms