Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
P04224 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.82□□□□□ -0.36
P04224 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.82□□□□□ -0.36
P04224 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.82□□□□□ -0.36
P04224 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.82□□□□□ -0.36
P04224 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
P04224 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
P04224 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P04224 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
P04224 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P04224 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
P04224 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
P04224 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
P04224 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P04224 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
P04224 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P04224 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P04224 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.82□□□□□ -0.36
P04224 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
P04224 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
P04224 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.81□□□□□ -0.36
P04224 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
P04224 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
P04224 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
P04224 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
P04224 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
P04224 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
P04224 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.81□□□□□ -0.36
P04224 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.81□□□□□ -0.36
P04224 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.81□□□□□ -0.36
P04224 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.81□□□□□ -0.36
P04224 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
P04224 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.81□□□□□ -0.36
P04224 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.81□□□□□ -0.36
P04224 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.81□□□□□ -0.36
P04224 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
P04224 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
P04224 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
P04224 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.8□□□□□ -0.36
P04224 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
P04224 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
P04224 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.8□□□□□ -0.36
P04224 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.8□□□□□ -0.36
P04224 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.8□□□□□ -0.36
P04224 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.8□□□□□ -0.36
P04224 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.8□□□□□ -0.36
P04224 Gm23634-201ENSMUST00000175071 91 ntBASIC12.8□□□□□ -0.36
P04224 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.8□□□□□ -0.36
P04224 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
P04224 Gm44454-201ENSMUST00000198541 138 ntBASIC12.8□□□□□ -0.36
P04224 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.8□□□□□ -0.36
P04224 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms