Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CfdP03953 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
CfdP03953 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.19□□□□□ -0.46
CfdP03953 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CfdP03953 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CfdP03953 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CfdP03953 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CfdP03953 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CfdP03953 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CfdP03953 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.19□□□□□ -0.46
CfdP03953 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CfdP03953 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CfdP03953 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CfdP03953 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CfdP03953 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CfdP03953 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CfdP03953 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
CfdP03953 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CfdP03953 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CfdP03953 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CfdP03953 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
CfdP03953 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CfdP03953 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CfdP03953 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.18□□□□□ -0.46
CfdP03953 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CfdP03953 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.18□□□□□ -0.46
CfdP03953 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.18□□□□□ -0.46
CfdP03953 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CfdP03953 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CfdP03953 Gm27646-201ENSMUST00000183989 110 ntBASIC12.18□□□□□ -0.46
CfdP03953 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CfdP03953 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CfdP03953 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CfdP03953 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CfdP03953 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CfdP03953 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CfdP03953 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CfdP03953 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CfdP03953 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CfdP03953 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.18□□□□□ -0.46
CfdP03953 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CfdP03953 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CfdP03953 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CfdP03953 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CfdP03953 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CfdP03953 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CfdP03953 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
CfdP03953 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CfdP03953 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CfdP03953 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.18□□□□□ -0.46
CfdP03953 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.17□□□□□ -0.46
CfdP03953 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.17□□□□□ -0.46
CfdP03953 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Grk6-205ENSMUST00000224653 2976 ntBASIC12.17□□□□□ -0.46
CfdP03953 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.17□□□□□ -0.46
CfdP03953 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CfdP03953 Gm8097-201ENSMUST00000117903 829 ntBASIC12.17□□□□□ -0.46
CfdP03953 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CfdP03953 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.17□□□□□ -0.46
CfdP03953 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.17□□□□□ -0.46
CfdP03953 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CfdP03953 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CfdP03953 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CfdP03953 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
CfdP03953 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CfdP03953 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CfdP03953 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CfdP03953 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CfdP03953 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.16□□□□□ -0.46
CfdP03953 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CfdP03953 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CfdP03953 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms