Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.34□□□□□ -0.27
P01852 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.34□□□□□ -0.27
P01852 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.34□□□□□ -0.27
P01852 Gm13365-201ENSMUST00000121188 973 ntBASIC13.34□□□□□ -0.27
P01852 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.34□□□□□ -0.27
P01852 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.34□□□□□ -0.27
P01852 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
P01852 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Gm18889-201ENSMUST00000174284 929 ntBASIC13.34□□□□□ -0.27
P01852 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.34□□□□□ -0.27
P01852 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
P01852 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.34□□□□□ -0.27
P01852 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.34□□□□□ -0.27
P01852 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.34□□□□□ -0.27
P01852 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
P01852 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
P01852 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
P01852 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
P01852 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
P01852 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
P01852 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
P01852 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
P01852 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.33□□□□□ -0.28
P01852 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P01852 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P01852 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
P01852 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.33□□□□□ -0.28
P01852 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P01852 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
P01852 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
P01852 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P01852 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P01852 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P01852 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.33□□□□□ -0.28
P01852 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
P01852 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P01852 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
P01852 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
P01852 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P01852 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
P01852 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
P01852 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P01852 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
P01852 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P01852 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P01852 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P01852 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P01852 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
P01852 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
P01852 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01852 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.32□□□□□ -0.28
P01852 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01852 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01852 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01852 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01852 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01852 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
P01852 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
P01852 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01852 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01852 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01852 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01852 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01852 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01852 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.32□□□□□ -0.28
P01852 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
P01852 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
P01852 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.32□□□□□ -0.28
P01852 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.32□□□□□ -0.28
P01852 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.32□□□□□ -0.28
P01852 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.32□□□□□ -0.28
P01852 Mir6990-201ENSMUST00000183724 91 ntBASIC13.32□□□□□ -0.28
P01852 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01852 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01852 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P01852 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01852 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01852 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
P01852 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.32□□□□□ -0.28
P01852 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms