Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tulp3O88413 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.63□□□□□ -0.23
Tulp3O88413 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tulp3O88413 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.63□□□□□ -0.23
Tulp3O88413 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tulp3O88413 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tulp3O88413 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
Tulp3O88413 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tulp3O88413 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tulp3O88413 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Tulp3O88413 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tulp3O88413 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tulp3O88413 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tulp3O88413 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.62□□□□□ -0.23
Tulp3O88413 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tulp3O88413 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tulp3O88413 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tulp3O88413 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tulp3O88413 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tulp3O88413 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tulp3O88413 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tulp3O88413 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.62□□□□□ -0.23
Tulp3O88413 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.62□□□□□ -0.23
Tulp3O88413 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.62□□□□□ -0.23
Tulp3O88413 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.62□□□□□ -0.23
Tulp3O88413 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tulp3O88413 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tulp3O88413 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tulp3O88413 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tulp3O88413 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tulp3O88413 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Tulp3O88413 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Tulp3O88413 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Tulp3O88413 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tulp3O88413 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tulp3O88413 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Tulp3O88413 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tulp3O88413 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.62□□□□□ -0.23
Tulp3O88413 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tulp3O88413 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tulp3O88413 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
Tulp3O88413 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tulp3O88413 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tulp3O88413 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tulp3O88413 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tulp3O88413 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tulp3O88413 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Tulp3O88413 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tulp3O88413 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tulp3O88413 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
Tulp3O88413 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tulp3O88413 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.61□□□□□ -0.23
Tulp3O88413 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tulp3O88413 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.61□□□□□ -0.23
Tulp3O88413 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tulp3O88413 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.61□□□□□ -0.23
Tulp3O88413 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.61□□□□□ -0.23
Tulp3O88413 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tulp3O88413 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tulp3O88413 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tulp3O88413 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tulp3O88413 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tulp3O88413 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tulp3O88413 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tulp3O88413 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.61□□□□□ -0.23
Tulp3O88413 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tulp3O88413 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tulp3O88413 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.61□□□□□ -0.23
Tulp3O88413 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.61□□□□□ -0.23
Tulp3O88413 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tulp3O88413 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tulp3O88413 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tulp3O88413 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tulp3O88413 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tulp3O88413 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tulp3O88413 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tulp3O88413 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tulp3O88413 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tulp3O88413 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tulp3O88413 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tulp3O88413 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tulp3O88413 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tulp3O88413 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tulp3O88413 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.6□□□□□ -0.23
Tulp3O88413 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.6□□□□□ -0.23
Tulp3O88413 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Tulp3O88413 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tulp3O88413 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tulp3O88413 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tulp3O88413 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.6□□□□□ -0.23
Tulp3O88413 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tulp3O88413 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tulp3O88413 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tulp3O88413 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tulp3O88413 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Tulp3O88413 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tulp3O88413 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.6□□□□□ -0.23
Tulp3O88413 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tulp3O88413 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tulp3O88413 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms