Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ubr1O70481 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC18.6■□□□□ 0.57
Ubr1O70481 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ubr1O70481 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ubr1O70481 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC18.6■□□□□ 0.57
Ubr1O70481 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC18.6■□□□□ 0.57
Ubr1O70481 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubr1O70481 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ubr1O70481 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubr1O70481 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubr1O70481 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ubr1O70481 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ubr1O70481 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.6■□□□□ 0.57
Ubr1O70481 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubr1O70481 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ubr1O70481 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubr1O70481 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubr1O70481 AL645783.1-201ENSMUST00000221416 1832 ntBASIC18.6■□□□□ 0.57
Ubr1O70481 Gm12485-201ENSMUST00000119641 291 ntBASIC18.6■□□□□ 0.57
Ubr1O70481 Gm15429-201ENSMUST00000151268 798 ntBASIC18.6■□□□□ 0.57
Ubr1O70481 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubr1O70481 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC18.6■□□□□ 0.57
Ubr1O70481 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC18.6■□□□□ 0.57
Ubr1O70481 CT030704.2-201ENSMUST00000228887 494 ntBASIC18.6■□□□□ 0.57
Ubr1O70481 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubr1O70481 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubr1O70481 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ubr1O70481 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ubr1O70481 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ubr1O70481 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.59■□□□□ 0.57
Ubr1O70481 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ubr1O70481 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ubr1O70481 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC18.59■□□□□ 0.57
Ubr1O70481 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ubr1O70481 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ubr1O70481 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ubr1O70481 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ubr1O70481 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ubr1O70481 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ubr1O70481 Gm11803-201ENSMUST00000119966 444 ntBASIC18.59■□□□□ 0.57
Ubr1O70481 Gm8835-201ENSMUST00000173096 1169 ntBASIC18.59■□□□□ 0.57
Ubr1O70481 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Ubr1O70481 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ubr1O70481 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ubr1O70481 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ubr1O70481 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ubr1O70481 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.59■□□□□ 0.57
Ubr1O70481 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ubr1O70481 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ubr1O70481 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ubr1O70481 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ubr1O70481 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ubr1O70481 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ubr1O70481 AC131068.2-201ENSMUST00000226175 1453 ntBASIC18.58■□□□□ 0.57
Ubr1O70481 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Ubr1O70481 Snora78-201ENSMUST00000158630 128 ntBASIC18.58■□□□□ 0.57
Ubr1O70481 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Ubr1O70481 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC18.58■□□□□ 0.57
Ubr1O70481 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ubr1O70481 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Ubr1O70481 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ubr1O70481 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ubr1O70481 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Ubr1O70481 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ubr1O70481 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubr1O70481 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC18.58■□□□□ 0.56
Ubr1O70481 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.58■□□□□ 0.56
Ubr1O70481 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubr1O70481 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ubr1O70481 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubr1O70481 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC18.58■□□□□ 0.56
Ubr1O70481 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ubr1O70481 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Ubr1O70481 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC18.58■□□□□ 0.56
Ubr1O70481 Gm15824-201ENSMUST00000119516 955 ntBASIC18.58■□□□□ 0.56
Ubr1O70481 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC18.58■□□□□ 0.56
Ubr1O70481 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC18.58■□□□□ 0.56
Ubr1O70481 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubr1O70481 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubr1O70481 Gm37015-201ENSMUST00000192763 1521 ntBASIC18.58■□□□□ 0.56
Ubr1O70481 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubr1O70481 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubr1O70481 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ubr1O70481 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ubr1O70481 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ubr1O70481 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubr1O70481 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubr1O70481 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubr1O70481 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubr1O70481 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC18.57■□□□□ 0.56
Ubr1O70481 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubr1O70481 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubr1O70481 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubr1O70481 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ubr1O70481 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ubr1O70481 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC18.57■□□□□ 0.56
Ubr1O70481 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ubr1O70481 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubr1O70481 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ubr1O70481 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms