Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.03■□□□□ 0.16
Prom1O54990 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.03■□□□□ 0.16
Prom1O54990 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.03■□□□□ 0.16
Prom1O54990 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Prom1O54990 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.03■□□□□ 0.16
Prom1O54990 Gm18187-201ENSMUST00000196476 984 ntBASIC16.03■□□□□ 0.16
Prom1O54990 Gm18018-201ENSMUST00000198273 408 ntBASIC16.03■□□□□ 0.16
Prom1O54990 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.03■□□□□ 0.16
Prom1O54990 Gm45384-201ENSMUST00000210451 277 ntBASIC16.03■□□□□ 0.16
Prom1O54990 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.03■□□□□ 0.16
Prom1O54990 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.03■□□□□ 0.16
Prom1O54990 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prom1O54990 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prom1O54990 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prom1O54990 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prom1O54990 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prom1O54990 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prom1O54990 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prom1O54990 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prom1O54990 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Prom1O54990 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prom1O54990 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Prom1O54990 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prom1O54990 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prom1O54990 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prom1O54990 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prom1O54990 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prom1O54990 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Prom1O54990 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Prom1O54990 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.02■□□□□ 0.16
Prom1O54990 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.02■□□□□ 0.16
Prom1O54990 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Prom1O54990 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.02■□□□□ 0.16
Prom1O54990 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.02■□□□□ 0.16
Prom1O54990 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prom1O54990 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Prom1O54990 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.02■□□□□ 0.15
Prom1O54990 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Prom1O54990 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Prom1O54990 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Prom1O54990 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Prom1O54990 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Prom1O54990 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Prom1O54990 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Prom1O54990 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Prom1O54990 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Prom1O54990 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Prom1O54990 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Prom1O54990 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.02■□□□□ 0.15
Prom1O54990 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prom1O54990 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prom1O54990 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prom1O54990 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prom1O54990 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Prom1O54990 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Prom1O54990 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prom1O54990 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prom1O54990 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prom1O54990 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prom1O54990 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Prom1O54990 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prom1O54990 Gm28631-201ENSMUST00000190740 334 ntBASIC16.01■□□□□ 0.15
Prom1O54990 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.01■□□□□ 0.15
Prom1O54990 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prom1O54990 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Prom1O54990 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prom1O54990 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prom1O54990 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Prom1O54990 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Prom1O54990 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prom1O54990 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Prom1O54990 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prom1O54990 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prom1O54990 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prom1O54990 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prom1O54990 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prom1O54990 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prom1O54990 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prom1O54990 Gm9115-201ENSMUST00000120192 1348 ntBASIC16■□□□□ 0.15
Prom1O54990 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Prom1O54990 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Prom1O54990 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Prom1O54990 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16■□□□□ 0.15
Prom1O54990 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16■□□□□ 0.15
Prom1O54990 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prom1O54990 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16■□□□□ 0.15
Prom1O54990 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Prom1O54990 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16■□□□□ 0.15
Prom1O54990 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16■□□□□ 0.15
Prom1O54990 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Prom1O54990 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16■□□□□ 0.15
Prom1O54990 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Prom1O54990 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16■□□□□ 0.15
Prom1O54990 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16■□□□□ 0.15
Prom1O54990 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Prom1O54990 Gm18624-201ENSMUST00000220966 658 ntBASIC16■□□□□ 0.15
Prom1O54990 AC159006.1-201ENSMUST00000226396 258 ntBASIC16■□□□□ 0.15
Prom1O54990 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prom1O54990 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prom1O54990 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms